Protein Alignment Rpt4R and psmc4

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_956044.2
• Gene: psmc4 / 326884
• ZFINID: ZDB-GENE-030131-5083
• Length: 418
• Species: Danio rerio
• Alignment Length: 392
• Identity: 162/392 - (41%)
• Similarity: 247/392 - (63%)
• Gaps: 3/392 - (0%)

  Fly     5 LANPPTDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEI 69
            ||..|.|.|.:.::.....:.||..|::.:.  ::|:.|.:..|:..:::::|.:||:..::|:.
Zfish    30 LAPEPEDLEDLYSIYKKLQQELEFLEVQEEY--IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQF 92

  Fly    70 LKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHE 134
            |:.:..:..||.::.|..|.|.....|::|.|||...|||...:..::..||.|.|..:..:|.:
Zfish    93 LEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSD 157

  Fly   135 DPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQ 199
            ...:|.|::|||:..|.:|:||.:||||.:.:::.::||.||:|.|:|||||.|||:||:|:|..
Zfish   158 QKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222

  Fly   200 MDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 264
            ..|.|::||.|..|.||:||..|::|::|..|:::.|.|||:||||||..:||...|.||||:||
Zfish   223 TTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQR 287

  Fly   265 TLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPL 329
            .|:||||||||||....||:||||||.||||||||||||||||:|.|||:...:..:.......:
Zfish   288 ILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKM 352

  Fly   330 NKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLD 394
            |...|:|.|..|...|..:|||:.:||.|||:.|:|.:|..|:.:||.||.:.:....:.|...
Zfish   353 NLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEF- 416

  Fly   395 YK 396
            ||
Zfish   417 YK 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	156/382 (41%)
		AAA	180..312	CDD:278434	82/131 (63%)
psmc4	NP_956044.2	PTZ00454	34..418	CDD:240423	158/386 (41%)
		AAA	202..335	CDD:278434	82/132 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.820