Protein Alignment Rpt4R and psmc3

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: XP_005169019.1
• Gene: psmc3 / 321947
• ZFINID: ZDB-GENE-030131-666
• Length: 427
• Species: Danio rerio
• Alignment Length: 403
• Identity: 160/403 - (39%)
• Similarity: 240/403 - (59%)
• Gaps: 38/403 - (9%)

  Fly    22 RTKLLEHR---------EIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPD- 76
            ||:||:..         .:..:|:|::||.|       ::.:.:|..:::..:|..:::.|..|
Zfish    32 RTRLLDSEIKIMKSEVLRVTHELQAMKDKIK-------ENTEKIKVNKTLPYLVSNVIELLDVDP 89

  Fly    77 --------NF-----------IVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPR 122
                    |.           ::|.|....|.:.....::.||||||..|.::..:..|:..||.
Zfish    90 NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPT 154

  Fly   123 EVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGT 187
            |.|..|..|..::.....|::||||.:||:||.|.|.||:.:.:.|..:||.||||.|:||||||
Zfish   155 EYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 219

  Fly   188 GKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRF 252
            ||||||||.|:|..|.|||:....:|..:||:.|:|:|:.||.|::..|.|||:||:||||.:||
Zfish   220 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 284

  Fly   253 SEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317
            ....:.|||:|||::|||||:|||....|||:|.||||.|.|||||||.||||||:|.|:|||.|
Zfish   285 DSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 349

  Fly   318 RMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRK 382
            |..|::||:..:|...::::|.:.:.:|.||||..:.:|.|||:.|||.....:..||:|:.:.:
Zfish   350 RARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILE 414

  Fly   383 IADNKKLESRLDY 395
            :...||  :.|.|
Zfish   415 VQAKKK--ANLQY 425

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	160/403 (40%)
		AAA	180..312	CDD:278434	79/131 (60%)
psmc3	XP_005169019.1	RPT1	12..420	CDD:224143	156/394 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820