Protein Alignment Rpt4R and psmc6

DIOPT Version :10

• Sequence 1: NP_648525.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_001003832.1
• Gene: psmc6 / 321585
• ZFINID: ZDB-GENE-030131-304
• Length: 389
• Species: Danio rerio
• Alignment Length: 387
• Identity: 312/387 - (80%)
• Similarity: 355/387 - (91%)
• Gaps: 0/387 - (0%)

  Fly    12 DERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPD 76
            :.|.:.|.:||.|||||:||:.:||.||::.|.:..:|||||:||||||||||:|||:|||||.:
Zfish     3 ENREKGLQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEE 67

  Fly    77 NFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNY 141
            .|||||:||||||||||||::|.|||||||||||:||||||||||||||||||||:|||||:|:|
Zfish    68 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSY 132

  Fly   142 AEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLK 206
            :|||||.:|||||||||||||.||::|.||||.|||||||||||||||||||||:|||:|.||||
Zfish   133 SEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLK 197

  Fly   207 VVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 271
            ||||:|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Zfish   198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 262

  Fly   272 QMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEID 336
            ||||||.|.:||||||||||||||||||||||||||:.|.||||.||:||||||:.|:.|.|:||
Zfish   263 QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDID 327

  Fly   337 YEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDYKPI 398
            |||:|||||.||||||||:|||||:||:|.|.|:|.||||||||||:||:|||||:|||||:
Zfish   328 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKLESKLDYKPV 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_648525.1	PRK03992	13..388	CDD:179699	302/374 (81%)
psmc6	NP_001003832.1	PRK03992	4..379	CDD:179699	302/374 (81%)