Protein Alignment Rpt4R and Psmc3

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_113783.2
• Gene: Psmc3 / 29677
• RGDID: 61905
• Length: 442
• Species: Rattus norvegicus
• Alignment Length: 403
• Identity: 164/403 - (40%)
• Similarity: 240/403 - (59%)
• Gaps: 38/403 - (9%)

  Fly    22 RTKLLEHR---------EIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPD- 76
            ||:||:..         .:..:|:|::||.|      |.|| .:|..:::..:|..:::.|..|
  Rat    47 RTRLLDSEIKIMKSEVLRVTHELQAMKDKIK------ENSE-KIKVNKTLPYLVSNVIELLDVDP 104

  Fly    77 --------NF-----------IVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPR 122
                    |.           ::|.|....|.:.....::.||||||..|.::..:..|:..||.
  Rat   105 NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPT 169

  Fly   123 EVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGT 187
            |.|..|..|..::.....|::||||.:||:||.|.|.||:.:.:.|..:||.||||.|:||||||
  Rat   170 EYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 234

  Fly   188 GKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRF 252
            ||||||||.|:|..|.|||:....:|..:||:.|:|:|:.||.|::..|.|||:||:||||.:||
  Rat   235 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 299

  Fly   253 SEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317
            ....:.|||:|||::|||||:|||....|||:|.||||.|.|||||||.||||||:|.|:|||.|
  Rat   300 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 364

  Fly   318 RMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRK 382
            |..|::||:..:|...:::||.:.:.:|.||||..:.:|.|||:.|||.....:..||:|:.:.:
  Rat   365 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILE 429

  Fly   383 IADNKKLESRLDY 395
            :...||  :.|.|
  Rat   430 VQAKKK--ANLQY 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	164/403 (41%)
		AAA	180..312	CDD:278434	79/131 (60%)
Psmc3	NP_113783.2	RPT1	28..435	CDD:224143	160/394 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820