Protein Alignment Rpt4R and Psmc6

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_001093979.1
• Gene: Psmc6 / 289990
• RGDID: 1308825
• Length: 403
• Species: Rattus norvegicus
• Alignment Length: 387
• Identity: 317/387 - (81%)
• Similarity: 357/387 - (92%)
• Gaps: 0/387 - (0%)

  Fly    12 DERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPD 76
            |.|.:||.:||.|||||:||:.:||.||::.|.:..:|||||:||||||||||:|||:|||||.:
  Rat    17 DPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEE 81

  Fly    77 NFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNY 141
            .|||||:||||||||||||::|.|||||||||||:||||||||||||||||||||:|||||||:|
  Rat    82 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSY 146

  Fly   142 AEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLK 206
            :|||||.:|||||||||||||.||::|.||||.|||||||||||||||||||||:|||:|.||||
  Rat   147 SEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLK 211

  Fly   207 VVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 271
            ||||:|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
  Rat   212 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 276

  Fly   272 QMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEID 336
            ||||||.|.:||||||||||||||||||||||||||:.|.||||.||:|||||||.|:.|.||||
  Rat   277 QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 341

  Fly   337 YEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDYKPI 398
            |||:|||||.||||||||:|||||:||:|.|.:||:||||||||||:||:|||||:|||||:
  Rat   342 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV 403

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	313/382 (82%)
		AAA	180..312	CDD:278434	121/131 (92%)
Psmc6	NP_001093979.1	RPT1	18..401	CDD:224143	313/382 (82%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166338783
Domainoid	1	1.000	249	1.000	Domainoid score	I2062
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53508
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	1	1.000	-	-		FOG0003819
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101751
Panther	1	1.100	-	-	O	PTHR23073
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2663
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.720