Protein Alignment Rpt4R and rpt-2

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_504558.1
• Gene: rpt-2 / 178988
• WormBaseID: WBGene00004502
• Length: 443
• Species: Caenorhabditis elegans
• Alignment Length: 391
• Identity: 157/391 - (40%)
• Similarity: 243/391 - (62%)
• Gaps: 13/391 - (3%)

  Fly     9 PTDDERVRALTNY---RTKLLEHREIESKLKALRDKYKVVNAEYEKSEDD--------LKALQSV 62
            |....::.|:|.:   |.|||:...|:..|  |.::..:.|.|..|.:::        :..|:..
 Worm    46 PDAASKLPAVTPHARCRLKLLKSERIKDYL--LMEQEFIQNQERLKPQEERQEEERAKVDELRGT 108

  Fly    63 GQMVGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPL 127
            ...||.:.:.:...:.||..:.|..:.|.....::||:|:||..|.|:.....::..|..:.||:
 Worm   109 PMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPM 173

  Fly   128 VYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLL 192
            |..|..|......||::|||.|||:|::|.:||||.:|:.:..:||.||||.:|||.||||||||
 Worm   174 VSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLL 238

  Fly   193 ARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTS 257
            |:|:|:|..|.||::|.|.::.||:|:..:::||:|..|.::.|.|:|:|||||:|.:|:...:.
 Worm   239 AKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSG 303

  Fly   258 ADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDIL 322
            .:||||||::|||||:||||:.|.||::|||||.::|||||:||||:|||:|.|||:|..:..|.
 Worm   304 GEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIF 368

  Fly   323 KIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNK 387
            :||...:....|::.|..:...|..:|||::.:||||||.|||..|..|..|||.|:...:...|
 Worm   369 QIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRK 433

  Fly   388 K 388
            |
 Worm   434 K 434

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	156/387 (40%)
		AAA	180..312	CDD:278434	73/131 (56%)
rpt-2	NP_504558.1	PTZ00361	1..443	CDD:185575	157/391 (40%)
		Prot_ATP_ID_OB	112..>179	CDD:293059	18/66 (27%)
		AAA	225..358	CDD:278434	73/132 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920