Protein Alignment Rpt4R and rpt-6

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_499609.1
• Gene: rpt-6 / 176661
• WormBaseID: WBGene00004506
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 405
• Identity: 175/405 - (43%)
• Similarity: 252/405 - (62%)
• Gaps: 12/405 - (2%)

  Fly     2 SAPLANPPTDDERVRALTNY--------RTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKA 58
            |.|.|...|::...:.|..|        :.|:.:..:...:|:|.|::   :|.:....:::|:.
 Worm    14 SKPTAQKLTEESDEKTLRKYFSTKVDDAQQKVADKSQNVRRLQAQRNE---LNTKVRMLKEELQQ 75

  Fly    59 LQSVGQMVGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPRE 123
            |...|..|||:.|.:.....:||.....:|||...:.|:...|..|.||||...:..:.:.||.:
 Worm    76 LHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNK 140

  Fly   124 VDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTG 188
            |||||..|..|...:..|..:|||.:||:|::||||||:.:|::|..:||:.|||.||:||||||
 Worm   141 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTG 205

  Fly   189 KTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFS 253
            |||||||:|...:..|::|..|.:|.|:|||.||::||:|..||:|.|.||||||||:||..|..
 Worm   206 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 270

  Fly   254 EGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVAR 318
            ..:..|.|:|||::|||||:|||:|...:|:||||||.|.||||||||||:|||:|.|.|:|.||
 Worm   271 GSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKAR 335

  Fly   319 MDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKI 383
            .||||||:..:|....|:...:.:.....:||:::::|||||:||||..|..|.||||..||.|:
 Worm   336 ADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKV 400

  Fly   384 ADNKKLESRLDYKPI 398
            . .|..|..:..|.:
 Worm   401 M-QKDSEKNMSIKKL 414

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	170/390 (44%)
		AAA	180..312	CDD:278434	80/131 (61%)
rpt-6	NP_499609.1	RPT1	10..414	CDD:224143	175/403 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920