Protein Alignment Rpt4R and ymel-1

DIOPT Version :10

• Sequence 1: NP_648525.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_001366715.1
• Gene: ymel-1 / 176460
• WormBaseID: WBGene00010842
• Length: 723
• Species: Caenorhabditis elegans
• Alignment Length: 383
• Identity: 129/383 - (33%)
• Similarity: 187/383 - (48%)
• Gaps: 61/383 - (15%)

  Fly     6 ANPPTDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEK---SEDDLKALQSVGQMVG 67
            |..||.|| |::...|.::||..:           |.|......||   .|.|||.|.
 Worm   120 AGKPTQDE-VKSPLTYFSELLAGK-----------KQKTSEGGVEKWNQYESDLKKLP------- 165

  Fly    68 EILKQLTPDNFIVKA--SNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYL---------- 120
            |..::...|.| ||.  |||   |.|..:  :.:|....||..:.:.......||
 Worm   166 ENQQRTYTDGF-VKGLLSNG---VSGAGK--DGKKSNTLTRFYIFLVFCIFFGYLTGRIRVRVGD 224

  Fly   121 ----------PREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISP 175
                      |:||:|       ||. .|.:.::.|:.:...|:.|:::. |.:|:.:.|:|...
 Worm   225 RQIGSLFFSNPQEVNP-------EDV-QVTFDDVRGMDEAKLEVEEIVDY-LKDPEKYSRLGGRL 280

  Fly   176 PKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIF 240
            |||.||.|||||||||||||||.:....|.....|...:..:|:.||.:|::|..|:...|||||
 Worm   281 PKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIF 345

  Fly   241 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLD 305
            :||||::|.:|.|  .|......:|:.:||::||||.....:.:|.||||.|.||.|||||||.|
 Worm   346 IDEIDSVGSKRVS--NSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFD 408

  Fly   306 RKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFA 363
            .::.:|.|:...|:||...:...:...|.||.:.:.|.|..|.|||:.|:..:|.|.|
 Worm   409 VRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKA 466

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_648525.1	PRK03992	13..388	CDD:179699	125/376 (33%)
ymel-1	NP_001366715.1	HflB	170..686	CDD:440233	110/314 (35%)