Protein Alignment Rpt4R and F56F11.4

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_001367906.1
• Gene: F56F11.4 / 175403
• WormBaseID: WBGene00018991
• Length: 432
• Species: Caenorhabditis elegans
• Alignment Length: 391
• Identity: 169/391 - (43%)
• Similarity: 239/391 - (61%)
• Gaps: 3/391 - (0%)

  Fly    10 TDDERVRALTNYRTKLLEHREIESKL--KALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQ 72
            :|::.:|.....:.:..|....|..:  :.|..:.|.:|.:....::::..|...|..|||:.|.
 Worm    41 SDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKA 105

  Fly    73 LTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPG 137
            :.....:||.....:|:|.....::...|..||||||......|...||.:|||||..|..|...
 Worm   106 MDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVP 170

  Fly   138 NVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDA 202
            :..|..:|||..||:|::||||||:.:|::|..:||:.|||.||||||||||||||||:|...:.
 Worm   171 DSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 235

  Fly   203 NFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 267
            .|::|..|.:|.|:|||.||::||:|..||:|.|.||||||||:||..|.......|.|:|||::
 Worm   236 TFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTML 300

  Fly   268 ELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKR 332
            |||||:|||:|...:|:||||||.|.||.|||||||:|||:|.|.|:|.||..|||||:..:|..
 Worm   301 ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLM 365

  Fly   333 GEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDYKP 397
            ..|..:.:.:.....:||:::::|||||:||||..|..|.||||..||.|:. .|..|..:..|.
 Worm   366 RGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVM-QKDSEKNMSIKK 429

  Fly   398 I 398
            :
 Worm   430 L 430

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	167/384 (43%)
		AAA	180..312	CDD:278434	80/131 (61%)
F56F11.4	NP_001367906.1	RPT1	51..430	CDD:224143	167/379 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920