DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4R and rpt-4

DIOPT Version :10

Sequence 1:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001022113.1 Gene:rpt-4 / 173384 WormBaseID:WBGene00004504 Length:406 Species:Caenorhabditis elegans


Alignment Length:398 Identity:298/398 - (74%)
Similarity:355/398 - (89%) Gaps:0/398 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAPLANPPTDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQM 65
            |..|......:|||.:||.:||.||.|.|:||.|||.||.|...:..:::|||:|:|:||||||:
 Worm     9 MVEPTGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQI 73

  Fly    66 VGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYN 130
            |||:||||:.:.|||||:|||||||||||.||||:||.||||:||:|||||||.||||||||||.
 Worm    74 VGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYK 138

  Fly   131 MTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARA 195
            |:||||||::|:::|||.:||||||||:||||:||::|.||||:|||||||:|||||||||||||
 Worm   139 MSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARA 203

  Fly   196 IASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADR 260
            :|||:|.||||||||||||||||||||:|||||.|||||||||:|||||||||||||||||||||
 Worm   204 VASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADR 268

  Fly   261 EIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIH 325
            ||||||||||||:||||:||:||:|||||||||||||||||||||||:||.||||.:|::|||||
 Worm   269 EIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIH 333

  Fly   326 AEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLE 390
            :..:.|.||||:||||||||.|:.|||||:|||||:||:|.:|||||.|||||||||:.|.|:||
 Worm   334 SNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLE 398

  Fly   391 SRLDYKPI 398
            ::|||||:
 Worm   399 TKLDYKPV 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 287/374 (77%)
rpt-4NP_001022113.1 PRK03992 21..391 CDD:179699 285/369 (77%)

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