DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4R and rpt-5

DIOPT Version :10

Sequence 1:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_491672.1 Gene:rpt-5 / 172238 WormBaseID:WBGene00004505 Length:430 Species:Caenorhabditis elegans


Alignment Length:428 Identity:160/428 - (37%)
Similarity:252/428 - (58%) Gaps:45/428 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PPTD-------------DERVRALT----NYRTKLLEH--REIESKLKALRDKYKVVNAEYEKSE 53
            ||.|             ||.:..::    ..||.||::  |.:.|:::.:......:....:::.
 Worm     6 PPKDGKNPEAMEVEDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENT 70

  Fly    54 DDLKALQSVGQMVGEILKQL-TPDN-----------------FIVKASNGPRY---VVGCRRQIN 97
            :.:|..:::..:|..:::.| ..||                 .::|.|....|   |||.   ::
 Worm    71 ERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQKTKCAVIKTSTRATYFLPVVGL---VD 132

  Fly    98 KEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPL 162
            .::||||..|.::..:..|:..||.|.|..|..|..::.....|::|||..:||:||.|.:.||:
 Worm   133 PDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPM 197

  Fly   163 LNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREM 227
            .:.|.|:.:||.||||.|:|||||||||::|||:|:|..:.|||:....:|..:||:.|:|:|:.
 Worm   198 THKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 262

  Fly   228 FAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPD 292
            ||.|::..|.|||:||:||||.:||....:.|||:|||::|||||:|||.....:|:|.||||.|
 Worm   263 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRID 327

  Fly   293 TLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICT 357
            .|||||||.||||||:|:|.|||.||..|::||:..:|...::::|.:.:.:|.||||..:.:|.
 Worm   328 VLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCV 392

  Fly   358 EAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDY 395
            |||:.|||.|...::.||||.|:.::...||  :.|:|
 Worm   393 EAGMIALRRDATEILHEDFMDAILEVQAKKK--ASLNY 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 152/401 (38%)
rpt-5NP_491672.1 PRK03992 32..423 CDD:179699 151/393 (38%)

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