DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and TBX18

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001073977.1 Gene:TBX18 / 9096 HGNCID:11595 Length:607 Species:Homo sapiens


Alignment Length:574 Identity:183/574 - (31%)
Similarity:256/574 - (44%) Gaps:149/574 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AVDPTTGLSGNVSGGGGGGGAGG-----GAGSGSPQHVTHNGHGHGHGLGGVAAVSGG------- 61
            |||     .|..|.|||.|..|.     ||....|...|......|..|...||  ||       
Human    49 AVD-----DGGCSRGGGAGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAA--GGCEDGFQQ 106

  Fly    62 GAS-VSGNGGH------RVVGGAGSPNELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPV 119
            ||| ::..||.      |.:...|:|....:..|:.|...|||.||..:..|||:||.||||||.
Human   107 GASPLASPGGSPKGSPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPA 171

  Fly   120 VKISASGLDPAAMYTVLLEFVQIDSHRWKYV--NGEWVPGGKAEVPPSNPIYVHPESPNFGAHWM 182
            :::..|||||...|.:.::.|.:|:.|::||  :.:|:..|.|:.|....:|:||:||..|..||
Human   172 MRVKISGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWM 236

  Fly   183 KEPISFAKVKLT-NKTNGNGQIMLNSLHKYEPRVHLVR--VGSEQRHVVTYP---------FPET 235
            ::.|||.|:||| |:.:..|.|:|:|:|||:||||::|  .|.:...:...|         ||||
Human   237 RQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPET 301

  Fly   236 QFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKE---------------RPD--TLYPHDTHYGWLI 283
            .|..||||||:::|.|||..|||||.|.|:..               ||.  ||...|      |
Human   302 VFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFED------I 360

  Fly   284 P---------------------PPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSS 327
            |                     |.||....:.:..:.|...:.         |:.|...|:.|:.
Human   361 PGIPKQGNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLG---------PNTSQLCSLAPAD 416

  Fly   328 GGSCDRYGRSLS--SRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTS 390
            ..:|.|.|.:|:  |.|:|.|    |:|        ....||...       :.|:||:.:..:|
Human   417 YSACARSGLTLNRYSTSLAET----YNR--------LTNQAGETF-------APPRTPSYVGVSS 462

  Fly   391 TGSVSTSVSSSSGGGIG---SAPSTGCFSSSYAQSGFMS-----VDASPTASVFSYPSSWQSNGN 447
                ||||:.|.||..|   |.|.|   |.|...|| ||     :..||:::.|:...:.|  |:
Human   463 ----STSVNMSMGGTDGDTFSCPQT---SLSMQISG-MSPQLQYIMPSPSSNAFATNQTHQ--GS 517

  Fly   448 YWNATSVPGPMPMNVCS--GRNISSHNSP----SP---TNGSPSYTTSSPSYTI 492
            | |...:..|     |:  |.|.|:  ||    ||   .:...|:..||||.|:
Human   518 Y-NTFRLHSP-----CALYGYNFST--SPKLAASPEKIVSSQGSFLGSSPSGTM 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 85/210 (40%)
TBX18NP_001073977.1 Engrailed homology 1 repressor. /evidence=ECO:0000305 18..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..141 28/98 (29%)
Nuclear localization signal. /evidence=ECO:0000305 36..40
TBOX 139..334 CDD:238106 85/194 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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