DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and Tbx19

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_114394.1 Gene:Tbx19 / 83993 MGIID:1891158 Length:446 Species:Mus musculus


Alignment Length:517 Identity:206/517 - (39%)
Similarity:254/517 - (49%) Gaps:155/517 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GSPNELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQI 142
            |.|.|  :.|:|.|:|..||.||:.:||||||||||||||||:|||.:||||.|||::||:||:.
Mouse    32 GDPTE--KQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTGLDPNAMYSLLLDFVRT 94

  Fly   143 DSHRWKYVNGEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNKTNGNGQIMLNS 207
            ||||||||||||||.||.||...:.:|:||:||||||||||.||||:|||||||.||.|||||||
Mouse    95 DSHRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKVKLTNKLNGGGQIMLNS 159

  Fly   208 LHKYEPRVHLVRVGSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKER---- 268
            ||||||:||:||||...|.|:...||||||||||||||||:|:||||||||||||||||||    
Mouse   160 LHKYEPQVHIVRVGGAHRMVMNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNHLK 224

  Fly   269 --PDTL--YPHDTHY---GWLIPPPTHYTAAAAA---VAAPPPLSIAQSHGLVASCPSVSSAESV 323
              |:.:  ..|.|:.   ||::..|.....||.:   .|.|.||....:|               
Mouse   225 DVPEAISESQHVTYSHLGGWILSNPDGVCTAANSNYQYATPLPLPAPHTH--------------- 274

  Fly   324 GPSSGGSCDRYGRSLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHS 388
                 ..|:.|.      .:...|..||                         |||     .:|.
Mouse   275 -----HGCEHYA------GLRGHRQAPY-------------------------PSA-----YMHR 298

  Fly   389 TSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYWNATS 453
            ..:.||:...|||:...:.|.|.:           :.|:.::|.||:.|.|.|        |...
Mouse   299 NHSPSVNLIESSSNNLQVFSGPDS-----------WTSLSSTPHASILSVPHS--------NGPI 344

  Fly   454 VPGPMPMNVCSGRNISSHNSPSP-----TNGSPSYTTSSPSYTIHHLTPHSHQYNMAQTDIYGTG 513
            .|||               ||.|     :||                                  
Mouse   345 NPGP---------------SPYPCLWTISNG---------------------------------- 360

  Fly   514 VGVGGGAGTTGSPQAAYGAAAHQVYHPTPTSPTHQLYTNA-------VLNAPSALSYSASGW 568
               |||...:||...|..:....:.:|..|||:..|.|.|       ||..||..|.:.|.|
Mouse   361 ---GGGPVASGSEVHASTSGTILLGNPAVTSPSSLLPTQATTSAGVEVLGEPSLTSIAVSTW 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 136/181 (75%)
Tbx19NP_114394.1 TBOX 39..221 CDD:214656 137/181 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 290 1.000 Domainoid score I1543
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 325 1.000 Inparanoid score I2467
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002920
OrthoInspector 1 1.000 - - otm43478
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4488
SonicParanoid 1 1.000 - - X2738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.950

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