DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and tbx21

DIOPT Version :10

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001164070.1 Gene:tbx21 / 797797 ZFINID:ZDB-GENE-080104-3 Length:609 Species:Danio rerio


Alignment Length:702 Identity:194/702 - (27%)
Similarity:275/702 - (39%) Gaps:219/702 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SGGGGGGGAGGGAGSGSPQHVTHNGHGHGH---GLGGVAAVSGGGASVSGNGGHRVVGGAGSPN- 81
            |.|...|.....|..||....:.:|.||.:   |....::.:|.....|...|:......|.|. 
Zfish    73 SAGAQTGRFYAPAPLGSCHFTSRSGTGHTYVPAGADAYSSANGKDVYPSSADGYTASFQHGFPRA 137

  Fly    82 --------ELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLE 138
                    ::....::.|::..||.:|.....|||:||.||||||.:..:.:.|||:|.|.:.::
Zfish   138 PMYSLPGLQVSGKTQVLLNNYPLWAKFHKYQTEMIITKQGRRMFPFLSFNITSLDPSAHYNIYVD 202

  Fly   139 FVQIDSHRWKYVNGEWVPGGKAE-VPPSNPIYVHPESPNFGAHWMKEPISFAKVKLT-NKTNGNG 201
            .|..|.|.|:|..|:||..|||| ..|.|.:|:||:|||.|.|||::.:||.|:||| ||.:.|.
Zfish   203 VVLADQHHWRYQGGKWVQCGKAEGNMPGNRMYMHPDSPNTGTHWMRQEVSFGKLKLTNNKGSSNN 267

  Fly   202 ---QIMLNSLHKYEPRVHLVRV---GSEQRHVV----TYPFPETQFIAVTAYQNEEVTSLKIKYN 256
               .|:|.|||||:||:|:|.|   |:|...:.    |:.||||||||||||||.::|.|||.:|
Zfish   268 VAQMIVLQSLHKYQPRLHIVEVKEDGTEDPFLTSKTQTFVFPETQFIAVTAYQNADITQLKIDHN 332

  Fly   257 PFAKAFLDAKERPDTLY-PHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSA 320
            ||||.|   ::..|||| |.|...  |.|.||                  :|..|::        
Zfish   333 PFAKGF---RDNYDTLYAPPDPDR--LTPSPT------------------ESQQLLS-------- 366

  Fly   321 ESVGPSSGGSCDRYGRSLSSRSVAP-TRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPT 384
                    |||..:...||.:.::| .::..|||..|             |.|.|    .|:.||
Zfish   367 --------GSCYPHQPYLSDQYMSPLPQSRFYSREPV-------------SMTQP----CPKDPT 406

  Fly   385 SLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFS-YPSSWQSNGNY 448
            |                      |..|....||..|        ..|....|| |.:.:.||..|
Zfish   407 S----------------------SPHSRWYLSSQQA--------VPPNRLDFSAYETEYTSNSLY 441

  Fly   449 WNATSVPGPMPMNVCSGRNISSHNSPSPTNGSPSYTTSSPSYTIHHLTPHSHQYNMAQTDIYGTG 513
                                    .|.|...||           ||  |.|:......|.  |..
Zfish   442 ------------------------KPFPLQSSP-----------HH--PLSYYSENPFTS--GAV 467

  Fly   514 VGVGGGAGT-TGSPQAAYGAAAHQVYHPTPTSPTHQLYTNAVLNAPSALS---YSASGWHNGSGA 574
            .....||.| :|.|...|      :.||..:.||..|.....:.:|:|.|   .:.|.:|     
Zfish   468 SSANPGAWTASGRPSPQY------LNHPHHSKPTSSLSWFRAVPSPAASSSPTATNSRFH----- 521

  Fly   575 EYGLYQNAAAAYYQPEYIPLEIGYATHPLEPVDVSKTLDDPQAAMYKPSDEQGSVITLECASSSL 639
                   |:.:..:|:..||                 |.|                      .|.
Zfish   522 -------ASPSLLEPQRQPL-----------------LQD----------------------KSK 540

  Fly   640 KSSHDIKIESSSLE--HAGERGTVGGGAA----VVSVPTAVVNGAPAVAADT 685
            :|:.|..||:.|::  .:.:.|...||.:    |....::..|..|..:|:|
Zfish   541 ESTEDTWIEAPSVKSVDSADSGLFEGGESKKRRVSPYTSSTENSPPNRSAET 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 T-box_TBXT_TBX19-like 87..264 CDD:410318 92/188 (49%)
tbx21NP_001164070.1 T-box_TBX21 150..340 CDD:410329 92/192 (48%)
T-box_assoc 363..608 CDD:465042 76/389 (20%)

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