DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and tbx21

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001164070.1 Gene:tbx21 / 797797 ZFINID:ZDB-GENE-080104-3 Length:609 Species:Danio rerio


Alignment Length:702 Identity:194/702 - (27%)
Similarity:275/702 - (39%) Gaps:219/702 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SGGGGGGGAGGGAGSGSPQHVTHNGHGHGH---GLGGVAAVSGGGASVSGNGGHRVVGGAGSPN- 81
            |.|...|.....|..||....:.:|.||.:   |....::.:|.....|...|:......|.|. 
Zfish    73 SAGAQTGRFYAPAPLGSCHFTSRSGTGHTYVPAGADAYSSANGKDVYPSSADGYTASFQHGFPRA 137

  Fly    82 --------ELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLE 138
                    ::....::.|::..||.:|.....|||:||.||||||.:..:.:.|||:|.|.:.::
Zfish   138 PMYSLPGLQVSGKTQVLLNNYPLWAKFHKYQTEMIITKQGRRMFPFLSFNITSLDPSAHYNIYVD 202

  Fly   139 FVQIDSHRWKYVNGEWVPGGKAE-VPPSNPIYVHPESPNFGAHWMKEPISFAKVKLT-NKTNGNG 201
            .|..|.|.|:|..|:||..|||| ..|.|.:|:||:|||.|.|||::.:||.|:||| ||.:.|.
Zfish   203 VVLADQHHWRYQGGKWVQCGKAEGNMPGNRMYMHPDSPNTGTHWMRQEVSFGKLKLTNNKGSSNN 267

  Fly   202 ---QIMLNSLHKYEPRVHLVRV---GSEQRHVV----TYPFPETQFIAVTAYQNEEVTSLKIKYN 256
               .|:|.|||||:||:|:|.|   |:|...:.    |:.||||||||||||||.::|.|||.:|
Zfish   268 VAQMIVLQSLHKYQPRLHIVEVKEDGTEDPFLTSKTQTFVFPETQFIAVTAYQNADITQLKIDHN 332

  Fly   257 PFAKAFLDAKERPDTLY-PHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSA 320
            ||||.|   ::..|||| |.|...  |.|.||                  :|..|::        
Zfish   333 PFAKGF---RDNYDTLYAPPDPDR--LTPSPT------------------ESQQLLS-------- 366

  Fly   321 ESVGPSSGGSCDRYGRSLSSRSVAP-TRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPT 384
                    |||..:...||.:.::| .::..|||..|             |.|.|    .|:.||
Zfish   367 --------GSCYPHQPYLSDQYMSPLPQSRFYSREPV-------------SMTQP----CPKDPT 406

  Fly   385 SLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFS-YPSSWQSNGNY 448
            |                      |..|....||..|        ..|....|| |.:.:.||..|
Zfish   407 S----------------------SPHSRWYLSSQQA--------VPPNRLDFSAYETEYTSNSLY 441

  Fly   449 WNATSVPGPMPMNVCSGRNISSHNSPSPTNGSPSYTTSSPSYTIHHLTPHSHQYNMAQTDIYGTG 513
                                    .|.|...||           ||  |.|:......|.  |..
Zfish   442 ------------------------KPFPLQSSP-----------HH--PLSYYSENPFTS--GAV 467

  Fly   514 VGVGGGAGT-TGSPQAAYGAAAHQVYHPTPTSPTHQLYTNAVLNAPSALS---YSASGWHNGSGA 574
            .....||.| :|.|...|      :.||..:.||..|.....:.:|:|.|   .:.|.:|     
Zfish   468 SSANPGAWTASGRPSPQY------LNHPHHSKPTSSLSWFRAVPSPAASSSPTATNSRFH----- 521

  Fly   575 EYGLYQNAAAAYYQPEYIPLEIGYATHPLEPVDVSKTLDDPQAAMYKPSDEQGSVITLECASSSL 639
                   |:.:..:|:..||                 |.|                      .|.
Zfish   522 -------ASPSLLEPQRQPL-----------------LQD----------------------KSK 540

  Fly   640 KSSHDIKIESSSLE--HAGERGTVGGGAA----VVSVPTAVVNGAPAVAADT 685
            :|:.|..||:.|::  .:.:.|...||.:    |....::..|..|..:|:|
Zfish   541 ESTEDTWIEAPSVKSVDSADSGLFEGGESKKRRVSPYTSSTENSPPNRSAET 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 92/193 (48%)
tbx21NP_001164070.1 TBOX 150..343 CDD:238106 92/195 (47%)
T-box_assoc 363..608 CDD:292794 76/389 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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