DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and Tbx18

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_076303.3 Gene:Tbx18 / 76365 MGIID:1923615 Length:613 Species:Mus musculus


Alignment Length:580 Identity:184/580 - (31%)
Similarity:263/580 - (45%) Gaps:139/580 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTSHILSAVDPTTGLSGNVSGGGGGGGA------------GGGAGSGSPQHVTHNGHGHGHG-- 51
            :.|.....||: ..|.|.  |||.|..|.            ..||.||..:.........|..  
Mouse    41 LATEEAAGAVE-DAGCSR--SGGAGEHGCSEADEEAAAPPPAAGAASGPARSCADAERSCGSRGA 102

  Fly    52 --------LGGVAAVSGGGASVSGNGGHRVVGGA--GSPNELDRNLRISLDDRELWLRFQNLTNE 106
                    |.|.:.::..|.|..|:   .|.|.|  |:|....:..|:.|...|||.||..:..|
Mouse   103 AGSCEDGFLQGASPLASPGGSPKGS---PVPGLARPGTPLPAPQAPRVDLQGAELWKRFHEIGTE 164

  Fly   107 MIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYV--NGEWVPGGKAEVPPSNPIY 169
            ||:||.||||||.:::..|||||...|.:.::.|.:|:.|::||  :.:|:..|.|:.|....:|
Mouse   165 MIITKAGRRMFPAMRVKISGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVY 229

  Fly   170 VHPESPNFGAHWMKEPISFAKVKLT-NKTNGNGQIMLNSLHKYEPRVHLVR--VGSEQRHVVTYP 231
            :||:||..|..||::.|||.|:||| |:.:..|.|:|:|:|||:||||::|  .|.:...:...|
Mouse   230 IHPDSPASGETWMRQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVP 294

  Fly   232 ---------FPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKE---------------RPD-- 270
                     ||||.|..||||||:::|.|||..|||||.|.|:..               ||.  
Mouse   295 SGEGVKAFSFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLR 359

  Fly   271 TLYPHDTHYGWLIP--PPTHYTAAAA-------AVAAPPPLSIAQSHGLVASC--------PSVS 318
            ||...|      ||  |....|:::|       ||.|..|..::.|     ||        |:.|
Mouse   360 TLTFED------IPGIPKQGNTSSSALLQGTGNAVPATHPHLLSGS-----SCSSPAFHLGPNTS 413

  Fly   319 SAESVGPSSGGSCDRYGRSLS--SRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQ 381
            ...|:.|:...:|.|.|.:|:  |.|:|.|    |||            ..|.||.:..|   |:
Mouse   414 QLCSLAPADYSACARSGLALNRYSTSLAET----YSR------------LTNQSSETFAP---PR 459

  Fly   382 TPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMS-----VDASPTASVFSYPSS 441
            ||:.:..:|..||:.|:..:.|... |.|.|   |.|...|| ||     :..||:.:.|:...:
Mouse   460 TPSYVSVSSNPSVNMSMGGTDGDTF-SCPQT---SLSMQISG-MSPQLQYIMPSPSGNAFAANQT 519

  Fly   442 WQSNGNYWNATSVPGPMPMNVCS--GRNISSHNSP----SP---TNGSPSYTTSSPSYTI 492
            .||:   :|...:..|     |:  |.|.|:  ||    ||   .:...|:..||||.|:
Mouse   520 HQSS---YNTFRLHSP-----CALYGYNFST--SPKLAASPEKIVSSQGSFLGSSPSGTM 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 85/210 (40%)
Tbx18NP_076303.3 Engrailed homology 1 repressor. /evidence=ECO:0000305|PubMed:17584735 18..28
Nuclear localization signal. /evidence=ECO:0000305|PubMed:17584735 36..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..94 14/55 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..145 8/33 (24%)
TBOX 145..340 CDD:238106 85/194 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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