DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and TBX2

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_005985.3 Gene:TBX2 / 6909 HGNCID:11597 Length:712 Species:Homo sapiens


Alignment Length:702 Identity:196/702 - (27%)
Similarity:276/702 - (39%) Gaps:170/702 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GLGGVAAVSGGGASVSGNGGHRVVGGAGSP-------------NELDRNLRISLDDRELWLRFQN 102
            ||.|.||.:...|:.:..|.|....|...|             :|::.:.:::|:.:|||.:|..
Human    56 GLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHK 120

  Fly   103 LTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNGEWVPGGKAEVPPSNP 167
            |..||::||:||||||..|:..||||..|.|.:|::.|..|..|:|:.|..|:..|||:......
Human   121 LGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKR 185

  Fly   168 IYVHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEPRVHLVRVG-------SEQ 224
            :|:||:||..|..||.:|::|.|:||||. ::.:|..:|||:|||:||.|:||..       |..
Human   186 MYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTF 250

  Fly   225 RHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDA-----KERPDTLYP----HDTH-- 278
            |   ||.||||.|||||||||:::|.|||..|||||.|.|.     ::|.....|    ::.|  
Human   251 R---TYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCK 312

  Fly   279 ---------YGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRY 334
                     .....|||......:.. |||.||.:.::.....||.:.|..|....|...:....
Human   313 PERDGAESDASSCDPPPAREPPTSPG-AAPSPLRLHRARAEEKSCAADSDPEPERLSEERAGAPL 376

  Fly   335 GRSLSSRSVAPTRTTPYSRPR---------VVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTS 390
            |||.:..|.:|||.|...|.|         ..:.||.:|..| ..|...:...|.:........:
Human   377 GRSPAPDSASPTRLTEPERARERRSPERGKEPAESGGDGPFG-LRSLEKERAEARRKDEGRKEAA 440

  Fly   391 TGS------VSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYW 449
            .|.      :.....|:|..|.|..|.....|..:.|..|                         
Human   441 EGKEQGLAPLVVQTDSASPLGAGHLPGLAFSSHLHGQQFF------------------------- 480

  Fly   450 NATSVPGPMPMNVCSGRNISSHNSPSPTNGSPSYTTSSP----SYTIHHLTPHSHQYNMAQTDIY 510
                  ||:.    :|:.:..|         |...|..|    :..:.||.          ..:.
Human   481 ------GPLG----AGQPLFLH---------PGQFTMGPGAFSAMGMGHLL----------ASVA 516

  Fly   511 GTGVGVGGGAGTT--------GSPQAAYGAAAHQVYH-----------PTPT----SPTHQLYTN 552
            |.|.|.|||.||.        |...:|...||...:|           |.||    .|....|..
Human   517 GGGNGGGGGPGTAAGLDAGGLGPAASAASTAAPFPFHLSQHMLASQGIPMPTFGGLFPYPYTYMA 581

  Fly   553 AVLNAPSALSYSASGWHNGSGAEYGLYQNAAAAYYQPEYIPLEIGYATHPL--EPVDVSKTLDDP 615
            |...|.|||..:::.            ..||||.......|. :|.|...|  .|..:..|:   
Human   582 AAAAAASALPATSAA------------AAAAAAAGSLSRSPF-LGSARPRLRFSPYQIPVTI--- 630

  Fly   616 QAAMYKPSDEQGSVITLECASSSLKSSHDIKIESSSLEHAGER--GTVGGGA 665
                 .||.   |::|...||...|::.....|.|.|.....|  |....||
Human   631 -----PPST---SLLTTGLASEGSKAAGGNSREPSPLPELALRKVGAPSRGA 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 88/194 (45%)
TBX2NP_005985.3 T-box_TBX2_3-like 103..287 CDD:410314 87/186 (47%)
PHA03307 300..>467 CDD:223039 36/168 (21%)
TBX 305..383 CDD:403708 17/78 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..450 30/138 (22%)
Repression domain 1 (RD1) 518..601 23/94 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 637..687 11/38 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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