DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and tbx2

DIOPT Version :10

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001030291.1 Gene:tbx2 / 619588 XenbaseID:XB-GENE-1018115 Length:685 Species:Xenopus tropicalis


Alignment Length:645 Identity:175/645 - (27%)
Similarity:255/645 - (39%) Gaps:141/645 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VAAVSGGGASVSGNGGH------RVVGGAGSPNELDRNLRISLDDRELWLRFQNLTNEMIVTKNG 113
            :|..:..|..||..|.|      |.:.......|::.:.:::|:.:|||.:|..|..||::||:|
 Frog    57 LAGAAEAGLHVSALGHHHQAAHLRSLKSLEPEEEVEDDPKVTLEAKELWDQFHKLGTEMVITKSG 121

  Fly   114 RRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNGEWVPGGKAEVPPSNPIYVHPESPNFG 178
            |||||..|:..||||..|.|.:|::.|..|..|:|:.|..|:..|||:......:|:||:||..|
 Frog   122 RRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATG 186

  Fly   179 AHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEPRVHLVRVG-------SEQRHVVTYPFPET 235
            ..||.:|::|.|:||||. ::.:|..:|||:|||:||.|:||..       |..|   ||.||||
 Frog   187 EQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFR---TYVFPET 248

  Fly   236 QFIAVTAYQNEEVTSLKIKYNPFAKAFLDA-----KERPDTLYPH---------------DTHYG 280
            .|||||||||:::|.|||..|||||.|.|.     ::|.....|.               ::...
 Frog   249 DFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLSLPSLRMYEEQCKADRDGAESDAS 313

  Fly   281 WLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYGRSL-SSRSVA 344
            ...|.|...:..:.....|.||.:.:|          :..|..|..|....||  |.: ::||.:
 Frog   314 SCDPAPGRDSLHSPLSTEPSPLRLHRS----------NREEKFGADSDQELDR--REVRTARSHS 366

  Fly   345 PT-RTTPYSRPRVVS-GSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGG-- 405
            |. ..:|.|.||:.. |...|           .|....::|.|.........|.|:....|..  
 Frog   367 PVGHRSPPSSPRLEDRGKDKN-----------TPEKKSESPESRKDGGDNVFSRSLEKDKGESRR 420

  Fly   406 ---IGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYWNATSVPGPMPMNVCSGRN 467
               ..|.|..|..|........:..|:.|..|                                 
 Frog   421 KEDSKSDPECGSLSKETFAPLMVQTDSPPHLS--------------------------------- 452

  Fly   468 ISSHNSPSPTNGSPSYTTSSPSYTIHHLTPHSHQYNMAQTDIYGTGVG------VGGGA---GTT 523
             :||......:|.......:|......|..|..|:.|........|:|      .|..|   |:.
 Frog   453 -ASHLQSLALSGLHGQQFFNPLNAAQPLFIHPGQFTMGPGAFSAMGMGHLLASMTGASALDNGSL 516

  Fly   524 GSPQAAYGAAA---HQVYH-------PTPT----SPTHQLYTNAVLNAPSALSYSASGWHNGSGA 574
            .|.|.|.|||.   |...|       |.|.    .|....|..|...|.||:.        .:.|
 Frog   517 SSVQGATGAATFPFHLSQHMLASQGIPMPAFGGLFPYPYTYMAAAAAAASAMP--------ATSA 573

  Fly   575 EYGLYQNAAAA------YYQPEYIPLEIGYATHPLEPVDVSKTLDDPQAAMYKPSDEQGS 628
            ...:.:|...:      .:.|..||:.|..:|: |....:|.:| :|.:...||...:.|
 Frog   574 ATTMPRNPFLSSTRPRLRFNPYQIPVGIPPSTN-LLTTGLSASL-NPGSESSKPGSSRES 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 T-box_TBXT_TBX19-like 87..264 CDD:410318 87/184 (47%)
tbx2NP_001030291.1 T-box_TBX2_3-like 96..277 CDD:410314 87/183 (48%)
T-box 99..277 87/180 (48%)
TBX 295..371 CDD:432659 15/87 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 606..660 7/28 (25%)

Return to query results.
Submit another query.