DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and tbx3a

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001095140.2 Gene:tbx3a / 556870 ZFINID:ZDB-GENE-070209-80 Length:689 Species:Danio rerio


Alignment Length:697 Identity:172/697 - (24%)
Similarity:255/697 - (36%) Gaps:221/697 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 ELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHR 146
            |::.:.::.|:.:|||..|.....||::||:||||||..|:..:|||..|.|.:|::.|..|..|
Zfish    93 EVEDDPKVHLEAKELWELFHKRGTEMVITKSGRRMFPPFKVRCTGLDKKAKYILLMDIVAADDCR 157

  Fly   147 WKYVNGEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHK 210
            :|:.|..|:..|||:......:|:||:||..|..||.:.::|.|:||||. ::.:|..:|||:||
Zfish   158 YKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVNFHKLKLTNNISDKHGFTILNSMHK 222

  Fly   211 YEPRVHLVRVG-------SEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDA--- 265
            |:||.|:||..       |..|   ||.||||.|||||||||:::|.|||.:|||||.|.|.   
Zfish   223 YQPRFHIVRANDILKLPYSTFR---TYVFPETDFIAVTAYQNDKITQLKIDHNPFAKGFRDTGNG 284

  Fly   266 -KERPDTLYPHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGG 329
             :|:...|                            .|...:|:.......:.:|.:|.|..:..
Zfish   285 RREKRKQL----------------------------ALQSMRSYEEQQKKENGTSDDSSGEQASF 321

  Fly   330 SCDRYGRSLSSRSVAPTRTTPYSRPRVVSGSGSNG-----SAGNASSTSPQPPSAPQTPTSLHST 389
            .|.|...|                 ..||.:|.|.     .:...|....:..:|.:.|.|    
Zfish   322 KCFRQASS-----------------PAVSTAGHNHLKDFCDSDEDSDEEDKDANAKEGPDS---- 365

  Fly   390 STGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYWNATSV 454
            |..|.:|..|.....|:|.                         |||....|  |:|.....|..
Zfish   366 SKISTTTEDSKDQDAGLGK-------------------------SVFGESDS--SSGRRSEKTRA 403

  Fly   455 PGPMPMNVCSGRNISSHNSPSPTNGSPSYTT------SSPSY---TI------------------ 492
            ....|:.:.|....|.....||.. .|:.||      |..:|   |:                  
Zfish   404 DSRSPITLISSTTRSGEELKSPVR-EPAKTTDDCRTVSKENYMPLTVQTDGAAHLNQNHLHNFGF 467

  Fly   493 ----------------HHLTPHSHQYNMAQTDIYGTGVGVG--------GGAGT----------- 522
                            |....|..|:||... ......|:|        ||.|:           
Zfish   468 PPGLAGQQFFNHLGGAHPFLLHPSQFNMGGA-FSNMAAGMGPILAAVSSGGVGSLDGSSLPSPSQ 531

  Fly   523 --TGSPQ---------AAYGAAAHQVYHPTPTSPTHQLYTNAVLNAPSALSYSASGWHNGSGAEY 576
              ||:|.         |:.|.|         .||...|:       |...:|.|:.....|.|..
Zfish   532 SLTGAPMPFHLQQHVLASQGLA---------MSPFGGLF-------PYPYTYMAAAAAASSAASS 580

  Fly   577 GLYQNAAAAYYQPEYIPLEIGYATHPLEPVDVSKTLDDPQAAMYKPSDEQGSVITLECASSSLKS 641
            .::::...:..:|     .:.|:.:.|..|..|..|......|                      
Zfish   581 SVHRHPFLSAVRP-----RLRYSPYSLPSVPDSTLLTTAMQPM---------------------- 618

  Fly   642 SHDIKIESSSLEHAGE-RGTVGGGAAVVSVPTAVVNGAPAVAADTWT 687
                  .||.||..|: ..|....||:.|..|:..:|:.:::..|.|
Zfish   619 ------ASSGLEVKGDGMNTSPASAALDSEVTSRSSGSVSLSPKTCT 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 85/193 (44%)
tbx3aNP_001095140.2 TBOX 99..282 CDD:238106 85/185 (46%)
TBX 298..385 CDD:204975 21/132 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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