DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and tbxt

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001008139.1 Gene:tbxt / 493501 XenbaseID:XB-GENE-478789 Length:434 Species:Xenopus tropicalis


Alignment Length:456 Identity:198/456 - (43%)
Similarity:250/456 - (54%) Gaps:104/456 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GSPNELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQI 142
            |.|.|  :.|::||::|:||:||:.|||||||||||||||||:|:|.|||||.||||.||:||..
 Frog    35 GDPTE--KELKVSLEERDLWMRFKELTNEMIVTKNGRRMFPVLKVSVSGLDPNAMYTFLLDFVAA 97

  Fly   143 DSHRWKYVNGEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNKTNGNGQIMLNS 207
            |:|||||||||||||||.|....:.:|:||:||||||||||:|:||:|||||||.||.|||||||
 Frog    98 DNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKDPVSFSKVKLTNKMNGGGQIMLNS 162

  Fly   208 LHKYEPRVHLVRVGSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERP--- 269
            |||||||:|:||||..||.:.::.||||||||||||||||:|:||||:|||||||||||||.   
 Frog   163 LHKYEPRIHIVRVGGTQRMITSHSFPETQFIAVTAYQNEEITALKIKHNPFAKAFLDAKERNDYK 227

  Fly   270 -------DTLYPHDTHYG-WLIP------PPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSA 320
                   |:.:.:.:..| ||||      .|..:|...|      |:|::..||           
 Frog   228 DILDEGIDSQHSNFSQLGTWLIPNGGSLCSPNPHTQFGA------PISLSSPHG----------- 275

  Fly   321 ESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTS 385
                      |:||.      |:...|:.||..|.|...:..|..|.|:|:......|.....|.
 Frog   276 ----------CERYS------SLRNHRSAPYPSPYVHRNNSPNNLADNSSACLSMLQSHDNWSTL 324

  Fly   386 LHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYWN 450
            .....||.:..|.|:.:                           .||:|  .|||.|..:    |
 Frog   325 QMPAHTGMLPMSHSAGT---------------------------PPTSS--QYPSLWSVS----N 356

  Fly   451 ATSVPGPMPMNVCSGRNIS--------------SHNSPSPTNGSPSYTTSSPSYTI---HHLTPH 498
            :|..|......:.:|  ||              ||..|||..|||.|...|.:...   :.:|.|
 Frog   357 STLTPVSQSGGITNG--ISSQYLRGSTPHYSSLSHAVPSPATGSPLYEHGSQTEIAENQYDVTAH 419

  Fly   499 S 499
            |
 Frog   420 S 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 135/181 (75%)
tbxtNP_001008139.1 T-box 44..219 CDD:307177 130/174 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 295 1.000 Domainoid score I1464
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I2411
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 1 1.000 - - FOG0002920
OrthoInspector 1 1.000 - - oto103942
Panther 1 1.100 - - O PTHR11267
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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