DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and tbx-43

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001040883.1 Gene:tbx-43 / 4363053 WormBaseID:WBGene00044798 Length:305 Species:Caenorhabditis elegans


Alignment Length:379 Identity:88/379 - (23%)
Similarity:150/379 - (39%) Gaps:96/379 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 ISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNGE 153
            ::|.::.||..|.:..||||:||.||.:||:::.:..||.....|.:.:....|...:.|:..|.
 Worm     5 VALMEKSLWREFDSQCNEMIITKIGRNLFPILEFAFKGLCEHLNYKIGVTMEPISYQKLKFTAGR 69

  Fly   154 WVP-GGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNKTN----GNGQIMLNSLHKYEP 213
            |.. ..:.|:...|.:::...    |...::..:...|:||||..:    .:..|.:.|:.:|.|
 Worm    70 WESLDIQEEMVQPNEVFLMKS----GRELLQRGLKLEKLKLTNSKDALQKSDQMIRVQSMRQYMP 130

  Fly   214 RVHLVRVGSEQRH--VVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPDTLYPHD 276
            .:::..:.....|  :..:.||||:||||||||:|.|..||::.|.||:.|.::           
 Worm   131 VLNIYEISPVGAHNQIGKFQFPETKFIAVTAYQSELVKQLKVQKNKFAQGFRES----------- 184

  Fly   277 THYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSS----GGSCDRYGRS 337
                         ..:.|..:...|||...|:....|..|:|| |::|.::    ||. ...|..
 Worm   185 -------------IKSNATSSTKRPLSTTSSNSSPDSTLSMSS-ENLGHTTKKGRGGG-QEIGVL 234

  Fly   338 LSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSP---QPPSAPQTPTSLHSTSTGSVSTSVS 399
            |:|::..                 |.....|.|...|   ||..|...|                
 Worm   235 LTSQNYQ-----------------SFDQFSNFSQAFPPNFQPSYAQHYP---------------- 266

  Fly   400 SSSGGGIGSAPSTGCFSSSYAQSG---FMSVDASPTASVFSYPSSWQSNGNYWN 450
                     .|.   :..:|||.|   |.|::.:|    :.:.::.......||
 Worm   267 ---------IPD---YQPNYAQFGAENFWSLNPAP----YDFTAAGNFQNFQWN 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 54/185 (29%)
tbx-43NP_001040883.1 T-box 5..183 CDD:279278 54/181 (30%)
Ashwin <170..>221 CDD:291969 17/75 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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