DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and Doc2

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster


Alignment Length:599 Identity:160/599 - (26%)
Similarity:229/599 - (38%) Gaps:205/599 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVN 151
            :.::|.:.:||.:|..:..|||:||:||||||.:::|.|||:..:.|.||||.|.|...|:|:..
  Fly    56 VEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSG 120

  Fly   152 GEWVPGGKAEVPPSNP--IYVHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLHKYEP 213
            .:|||.|.||  |.:|  :|:||:||..||||..:||.|.||||||.| :.:|.|:|.|:|||:|
  Fly   121 SQWVPAGGAE--PQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQP 183

  Fly   214 RVHLVRVGS--------EQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPD 270
            |:|::|...        :|..|    |.||:|:|||||||:.:|.|||..|||||.|.:.     
  Fly   184 RLHVIRTADLAQIPWAPQQAFV----FAETEFVAVTAYQNDRITKLKIDNNPFAKGFRET----- 239

  Fly   271 TLYPHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYG 335
                                                                            |
  Fly   240 ----------------------------------------------------------------G 240

  Fly   336 RSLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSS 400
            :|...|.:                           |:||......|:|:..||.|..  .:.:|.
  Fly   241 QSRCKRKM---------------------------SSSPTGEDQDQSPSLSHSQSQS--ESDMSP 276

  Fly   401 SSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYWNATSVPGPMPMNVCSG 465
            :.|||     .|...:||...|....:            ...:|||              :.|| 
  Fly   277 TKGGG-----ETAGGTSSIGDSDGPQI------------KRLRSNG--------------SACS- 309

  Fly   466 RNISSHNSPSPTNGSPSYTTSSPSYTIHHLTPHSHQYNMAQTDIYGTGVGVGGGAGTTGSPQAAY 530
              :||........|:.|....||.   .||..|||.:                       |..|.
  Fly   310 --LSSSLDDQSVPGASSLALGSPP---PHLHSHSHPH-----------------------PLQAR 346

  Fly   531 GAAAHQVYHPTPTSPTHQLYTNAVLNAPSALSYSASGWHNGSGAEYGLYQNAAAAYYQPEYIP-- 593
            .|::..:.|       .|....::|. ||.:..:.:  :.|...|||     .|....|.|.|  
  Fly   347 SASSVFMQH-------FQQNMQSLLR-PSLVDLACT--YFGRPHEYG-----GAIQASPMYPPAA 396

  Fly   594 -LEIGYATHP---LEP-VDVSKTLDDPQAAMYKPSDEQGSVITLECASSSLKSSHDIKIESSSLE 653
             |:.|...||   |.| |..:..:.|...|.....|......|||      :|:.:..:|..|..
  Fly   397 MLQAGLGPHPGLNLPPGVSGADLISDESGAEELELDVGSETSTLE------QSTQEQPLEQPSTR 455

  Fly   654 HAG--ERGTVGGGA 665
            ..|  ....:|||:
  Fly   456 SKGFSISAILGGGS 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 89/191 (47%)
Doc2NP_648282.1 TBOX 55..242 CDD:238106 90/260 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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