DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and Doc3

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster


Alignment Length:391 Identity:137/391 - (35%)
Similarity:188/391 - (48%) Gaps:85/391 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRW 147
            |..::...|::.|||.:|.::..|||:||.||||||.:::|.|||:..|.|.||||.|.|...|:
  Fly    55 LPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRY 119

  Fly   148 KYVNGEWVPGGKAEVPPSNP--IYVHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 209
            |:...:|||.|.||  |.:|  :|:|||||..|.||..:.:.|:||||||.| :.||.|:|.|:|
  Fly   120 KFSGSQWVPAGGAE--PQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMH 182

  Fly   210 KYEPRVHLVRVGSEQRHVVTYP-----FPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDA---- 265
            ||:||:|::|. |:...:...|     ||||:|||||||||:.:|.|||..|||||.|.::    
  Fly   183 KYQPRLHVIRT-SDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSR 246

  Fly   266 -----KERPDTLYP-----------------------------HDTHYGWLIPPPTHYTAAAAA- 295
                 .:.|....|                             |.:|:.  :|...||...|.. 
  Fly   247 CKRKINDSPPPTQPEANQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHS--VPMQRHYLLDALEA 309

  Fly   296 ---VAAPPPLSIAQSHGLVASCPS-----VSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYS 352
               |.||||.:|..:..:..:.||     .|.|.||..||.||..  |.|.:.|.......|   
  Fly   310 NFYVPAPPPPAIEYARHIGGAYPSWAYTPPSPASSVSSSSAGSTS--GESAADREADADADT--- 369

  Fly   353 RPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSS 417
               .|...|:       :..:|.|||.|...|          :|:.:|||.....:.|....||.
  Fly   370 ---FVDVVGT-------APAAPPPPSPPVPAT----------ATAPASSSSDPTMAKPKRSSFSI 414

  Fly   418 S 418
            |
  Fly   415 S 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 92/198 (46%)
Doc3NP_648280.1 TBOX 58..245 CDD:238106 92/189 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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