DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and ocm

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster


Alignment Length:705 Identity:132/705 - (18%)
Similarity:223/705 - (31%) Gaps:194/705 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GAGSPNEL---DRNLRISL--DDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTV 135
            |:|:|.|:   |.:.:.||  .:|...|:.::..:|.:: .:|..|....|.||.|      |.:
  Fly  1453 GSGAPYEVLAGDVSPQTSLLMKNRSRDLKRKSQADERLL-PSGPSMTKSSKPSAGG------YPI 1510

  Fly   136 LLEFVQIDSHRWKYVNGEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNKTNGN 200
            ........:..:...:|:..|...|:   :|......:|...|   ::..|.|.||    ..|..
  Fly  1511 AASVATSTTSAFASSSGKSTPVCTAK---TNSASTKNKSSATG---IRSNIEFRKV----NHNDV 1565

  Fly   201 GQIMLNSLHKYEPRVHLVRVGSEQRHVVTYPFPE----TQFIAVTAYQNEEVTSLKIKYNPFAKA 261
            .::.:..||:.:.|..::.:..:..|:....|.:    |:..:|.....|....:|:::  |..|
  Fly  1566 DELQIPELHQTDHRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQF--FPNA 1628

  Fly   262 FLDAKERPDTLYPHDTHYGWL---IPPP------------------------------------- 286
            ..||...|.:  ....::|.|   :|||                                     
  Fly  1629 PYDAFVTPSS--KKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRSMAFWV 1691

  Fly   287 ------THY---TAAAAAVAAPPPLSIAQSHGL-VASCPSVSSAESVGPSSGGSCDRYGRSLSSR 341
                  .|:   |.:.|.:||....:|....|| |...||..|.|..               .::
  Fly  1692 LQINGQVHFEIDTESTAKLAAQQKNAIGTPPGLNVLKIPSQLSVEIE---------------KNQ 1741

  Fly   342 SVAPTRTTPYSRPRVVSGSGSNGSAGNASST-SPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGG 405
            ...|        |.||..|......|..... ..|.....:|........||..           
  Fly  1742 DEVP--------PVVVIDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFT----------- 1787

  Fly   406 IGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYP----SSWQSNGNYWN-ATSVPGPMPMNVCSG 465
            |.:.||          ||.:.:..|.:|...|:|    ::...:|.:.. ..:||........:.
  Fly  1788 IQTLPS----------SGALQITISDSAETSSHPAKDVNTCHFSGGFMPFIANVPAKFGETAPTT 1842

  Fly   466 RNISSHNSPSPTNGSPSYTTSSPSYTIHHLTPHSHQY---NMAQTDIYGTGVGVGGGAGTTGSPQ 527
            :.::.....:.:...|...|||.|   .||......|   |.:..:::.:||..||...|....|
  Fly  1843 QFLTPQVQVTTSQSGPETLTSSSS---SHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQ 1904

  Fly   528 AAYGAAAHQVYHPTPTSPTHQLYTN----AVLNAPSALSYSASGWHNGSGAEYGLY--QNAAAAY 586
                       ..|..:.|.|:..|    |:......::.:||.....:.|...:.  |:.:.:.
  Fly  1905 -----------EKTLPNETVQVVKNKKSIAITGIHKQVTKAASSTATVTAARAPVVKPQSTSVSK 1958

  Fly   587 YQPEYIPLEIGYATHPLE-----------------PVDVSKTLDDPQ----AAMYKPSDEQGSVI 630
            ..|   |:..|..|.|..                 |.:....:..|:    .|..||....||.:
  Fly  1959 VAP---PIRPGATTQPKTLVRLYPKPALAAGRKSLPANAKTPVATPRQSQPVACDKPPLVSGSTL 2020

  Fly   631 TLECASSSLKSSHDIKIESSSL---EHAGERGTVGGGAAVVSVPTAVVNGAPAVA 682
            ......|:.||     :.|..|   ||...|         .|:|..|....||.|
  Fly  2021 PALVEPSARKS-----LPSKPLAAGEHLRPR---------QSLPAKVTANPPAAA 2061

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 36/187 (19%)
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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