DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and mid

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster


Alignment Length:470 Identity:139/470 - (29%)
Similarity:195/470 - (41%) Gaps:138/470 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QHVTHNGHGHGH--------------GLGGVAAVSGGG------ASVSGNGGHRVVGGAGSPNEL 83
            ||..|:.|.|.:              ..||..|.:...      :|.|..|  |......||...
  Fly    95 QHHQHHQHHHNNNNNNNNNNVAHKSRNSGGAVAQTASAESQLNTSSTSSQG--RCSTPPQSPGTE 157

  Fly    84 DRNLRIS-------------------------LDDRELWLRFQNLTNEMIVTKNGRRMFPVVKIS 123
            |...|::                         |:.:|||.||.:|..|||:||.||||||.|::|
  Fly   158 DSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVS 222

  Fly   124 ASG----LDPAAMYTVLLEFVQIDSHRWKYV--NGEWVPGGKAEVPPSNPIYVHPESPNFGAHWM 182
            .||    :.||..|.||::.:.:||.|::|.  ...|:..|||:..|...:|.||:||.......
  Fly   223 FSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALR 287

  Fly   183 KEPISFAKVKLT-NKTNGNGQIMLNSLHKYEPRVHLVRVGSEQR------------HVVTYPFPE 234
            |:.|||.||||| |:.:.||||:|||:|:|:||:||||:...|.            | .||.|||
  Fly   288 KQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDH-KTYVFPE 351

  Fly   235 TQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPD-------------------TLYPH----- 275
            |.|.|||||||:.:|.|||..|||||.|.|:....|                   .|:|.     
  Fly   352 TVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPDPLMQQ 416

  Fly   276 -------------------------DTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCP 315
                                     ::.|..|:.|..:..|||||...|||..:...|......|
  Fly   417 FAAQGDPSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWP 481

  Fly   316 SVSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAP 380
            .:::......:...:..:......:::.|                   .:|..|::.:|.||...
  Fly   482 QLTAGFLASANQQAAAAQAAAQAQAQAQA-------------------AAAAMAANRTPPPPPTA 527

  Fly   381 QTPTSLHSTSTGSVS 395
            .||:   |||:||.|
  Fly   528 STPS---STSSGSPS 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 94/225 (42%)
midNP_001260096.1 TBOX 185..384 CDD:238106 93/199 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.