DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and Tbx20

DIOPT Version :10

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001388019.1 Gene:Tbx20 / 315497 RGDID:1309396 Length:446 Species:Rattus norvegicus


Alignment Length:463 Identity:140/463 - (30%)
Similarity:199/463 - (42%) Gaps:143/463 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GGAGS-------------------PNELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVV 120
            ||.||                   |:|....:..||:.:|||.:|..|..|||:||:||||||.:
  Rat    69 GGGGSSPSSSSLCTEPLIPTTPIIPSEEMAKIACSLETKELWDKFHELGTEMIITKSGRRMFPTI 133

  Fly   121 KISASGLDPAAMYTVLLEFVQIDSHRWKYV--NGEWVPGGKAEVPPSNPIYVHPESPNFGAHWMK 183
            ::|.||:||.|.|.||::.|.:|:.|::|.  ...|:..|||:.|....:||||:||..|...:|
  Rat   134 RVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLK 198

  Fly   184 EPISFAKVKLT-NKTNGNGQIMLNSLHKYEPRVHLVR--------VGSEQRHVVTYPFPETQFIA 239
            :.:||.||||| |:.:.:|.|:|||:|||:||||:::        :..:.....|:.||||.|.|
  Rat   199 QMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTA 263

  Fly   240 VTAYQNEEVTSLKIKYNPFAKAFLDAKERPDTLYPHDTHYGWLIPPPTHYTAAAAAVAAPPPLSI 304
            ||||||:.:|.|||..|||||.|.|:....|                         :......|:
  Rat   264 VTAYQNQLITKLKIDSNPFAKGFRDSSRLTD-------------------------IERESVESL 303

  Fly   305 AQSHGLVASCPSVSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNA 369
            .|.|.                        |.||       |.||           .|.....|..
  Rat   304 IQKHS------------------------YARS-------PIRT-----------YGEEDVLGEE 326

  Fly   370 SSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGF-----MSVDA 429
            |.|:|...||..|..:|      |:|:.|||||     |.|            ||     ::...
  Rat   327 SQTTPNRGSAFTTSDNL------SLSSWVSSSS-----SFP------------GFQHPQPLTALG 368

  Fly   430 SPTASVFSYPSSWQSNGNYWNATSVPGPMPMNVCSGRNISSHNSPSPTNGSPSYTTSSPSYTIHH 494
            :.|||:               ||.:|.|:..::.....:....:||..  :.|...|.|::...|
  Rat   369 TSTASI---------------ATPIPHPIQGSLPPYSRLGMPLTPSAI--ASSMQGSGPTFPSFH 416

  Fly   495 LTPHSHQY 502
            : |..|.|
  Rat   417 M-PRYHHY 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 T-box_TBXT_TBX19-like 87..264 CDD:410318 87/187 (47%)
Tbx20NP_001388019.1 T-box_TBX20-like 100..289 CDD:410319 87/188 (46%)
P-loop containing Nucleoside Triphosphate Hydrolases <320..>408 CDD:476819 29/127 (23%)

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