DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and Tbx5

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001009964.1 Gene:Tbx5 / 304514 RGDID:1305702 Length:517 Species:Rattus norvegicus


Alignment Length:585 Identity:164/585 - (28%)
Similarity:224/585 - (38%) Gaps:220/585 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVN 151
            :::.|.:|||||:|..:..|||:||.||:|||..|:..:||:|...|.:|::.|..|.||:|:.:
  Rat    54 IKVFLHERELWLKFHEVGTEMIITKAGRQMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFAD 118

  Fly   152 GEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEPRV 215
            .:|...||||......:||||:||..|||||::.:||.|:||||. .:..|.|:|||:|||:||:
  Rat   119 NKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRL 183

  Fly   216 HLVRV------GSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF------------ 262
            |:|:.      ||:.....|:.||||.|||||:|||.::|.|||:.|||||.|            
  Rat   184 HIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDLELHRMS 248

  Fly   263 -LDAKERPDTLYPHDT-------HYGW-----------------------------LIPPPTHYT 290
             :.:||.|  :.|..|       |..:                             |:|||.   
  Rat   249 RMRSKEYP--VVPRSTVRHKVANHSPFSSETRALSTSSNLGSQYQCENGVSGPSQDLLPPPN--- 308

  Fly   291 AAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYSRPR 355
                      |..:||.|..:..|......|         |.             :...||.:|.
  Rat   309 ----------PYPLAQEHSQIYHCTKRKDEE---------CS-------------STEHPYKKPY 341

  Fly   356 VVSGSGSNGSAGNASSTSPQPPSA------PQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGC 414
            :              .|||.....      ||..         .:|||..:.      ||....|
  Rat   342 M--------------ETSPSEEDTFYRSGYPQQQ---------GLSTSYRTE------SAQRQAC 377

  Fly   415 FSSSYAQSGFMSVDASPTASVFSYP----SSWQSNGNYWNATSVPGPMPMNVCSGRNISSHNSPS 475
            .   ||.|      |.|:..|.|..    ::|.|..:|.:.| |....||:....::.|:|    
  Rat   378 M---YASS------APPSEPVPSLEDISCNTWPSMPSYSSCT-VTTVQPMDRLPYQHFSAH---- 428

  Fly   476 PTNGSPSYTTSSPSYTIHHLTPHSHQYNMAQTDIYGTGVGVGGGAGTTGSPQAAYGAAAHQVYHP 540
                    .||.|      |.|..                  .|....||||...|...||    
  Rat   429 --------FTSGP------LVPRL------------------AGMANHGSPQLGEGMFQHQ---- 457

  Fly   541 TPTSPTHQ-----------------------LYTNAVLNAPSALS----YSASG------WHNGS 572
              ||.|||                       |||:.|   |..||    :|..|      |...|
  Rat   458 --TSVTHQPVVRQCGPQTGLQSPGSLQPPEFLYTHGV---PRTLSPHQYHSVHGVGMVPEWSENS 517

  Fly   573  572
              Rat   518  517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 89/200 (45%)
Tbx5NP_001009964.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46
TBOX 53..241 CDD:238106 88/186 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..313 6/55 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..369 11/73 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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