DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and Tbxt

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:XP_017444362.1 Gene:Tbxt / 292301 RGDID:1310141 Length:437 Species:Rattus norvegicus


Alignment Length:461 Identity:203/461 - (44%)
Similarity:253/461 - (54%) Gaps:103/461 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GSPNELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQI 142
            |.|.|  |.||:.|::.||||||:.|||||||||||||||||:|::.|||||.|||:.||:||..
  Rat    35 GDPTE--RELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAA 97

  Fly   143 DSHRWKYVNGEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNKTNGNGQIMLNS 207
            |:|||||||||||||||.|....:.:|:||:||||||||||.|:||:|||||||.||.|||||||
  Rat    98 DNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNS 162

  Fly   208 LHKYEPRVHLVRVGSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPD-- 270
            |||||||:|:||||..||.:.::.||||||||||||||||:|:||||||||||||||||||.|  
  Rat   163 LHKYEPRIHIVRVGGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNDHK 227

  Fly   271 --TLYPHDTHY-------GWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPS 326
              ...|.|...       |||:|        .|....||    |.||      |....:.|: ||
  Rat   228 DVMEEPGDCQQPGYSQSGGWLVP--------GAGTLCPP----ASSH------PQFGGSLSL-PS 273

  Fly   327 SGGSCDRYGRSLSSRSVAPT----RTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLH 387
            :.| |:||          ||    |::||                      |.|.:......:..
  Rat   274 THG-CERY----------PTLRNHRSSPY----------------------PSPYAHRNNSPTYA 305

  Fly   388 STSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQ-SNGNYWNA 451
            ..|:..:|...|..:...:|....|.....|:        :|||......|||.|. |||     
  Rat   306 DNSSACLSMLQSHDNWSSLGVPAHTSMLPVSH--------NASPPTGSSQYPSLWSVSNG----- 357

  Fly   452 TSVPGPMPMNVCSG------RNISSHNSP---------SPTNGSPSYTTSSPSYTIHHLTPHSHQ 501
            |..||.....|.:|      |...:|.:|         |.::|||.|..::   |:..::  ..|
  Rat   358 TITPGSQTAGVSNGLGAQFFRGSPAHYAPLTHTVSAATSSSSGSPMYEGAA---TVTDIS--DSQ 417

  Fly   502 YNMAQT 507
            |:.||:
  Rat   418 YDTAQS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 135/181 (75%)
TbxtXP_017444362.1 TBOX 42..224 CDD:214656 136/181 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 290 1.000 Domainoid score I1491
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I2412
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 1 1.000 - - FOG0002920
OrthoInspector 1 1.000 - - otm45542
orthoMCL 1 0.900 - - OOG6_107075
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2738
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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