DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and Tbx5

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:XP_006530342.1 Gene:Tbx5 / 21388 MGIID:102541 Length:537 Species:Mus musculus


Alignment Length:580 Identity:164/580 - (28%)
Similarity:223/580 - (38%) Gaps:209/580 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVN 151
            :::.|.:|||||:|..:..|||:||.||||||..|:..:||:|...|.:|::.|..|.||:|:.:
Mouse    73 IKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFAD 137

  Fly   152 GEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEPRV 215
            .:|...||||......:||||:||..|||||::.:||.|:||||. .:..|.|:|||:|||:||:
Mouse   138 NKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRL 202

  Fly   216 HLVRV------GSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF------------ 262
            |:|:.      ||:.....|:.||||.|||||:|||.::|.|||:.|||||.|            
Mouse   203 HIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDLELHRMS 267

  Fly   263 -LDAKERPDTLYPHDT--------HYGW-----------------------------LIPPPTHY 289
             :.:||.|  :.|..|        |..:                             |:|||.  
Mouse   268 RMQSKEYP--VVPRSTVRHKVTSNHSPFSSETRALSTSSNLGSQYQCENGVSGPSQDLLPPPN-- 328

  Fly   290 TAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYSRP 354
                       |..:||.|..:..|......|         |.             :...||.:|
Mouse   329 -----------PYPLAQEHSQIYHCTKRKDEE---------CS-------------STEHPYKKP 360

  Fly   355 RVVSGSGSNGSAGNASSTSPQPPSA------PQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTG 413
            .:              .|||.....      ||..         .:|||..:.      ||....
Mouse   361 YM--------------ETSPSEEDTFYRSGYPQQQ---------GLSTSYRTE------SAQRQA 396

  Fly   414 CFSSSYAQSGFMSVDASPTASVFSYP----SSWQSNGNYWNATSVPGPMPMNVCSGRNISSHNSP 474
            |.   ||.|      |.|:..|.|..    ::|.|..:|.:.| |....||:....::.|:|   
Mouse   397 CM---YASS------APPSEPVPSLEDISCNTWPSMPSYSSCT-VTTVQPMDRLPYQHFSAH--- 448

  Fly   475 SPTNGSPSYTTSSPSYTIHHLTPHSHQYNMAQTDIYGTGVGVGGGAGTTGSPQAAYGAAAHQ--V 537
                     .||.|      |.|..                  .|....||||...|...||  |
Mouse   449 ---------FTSGP------LVPRL------------------AGMANHGSPQLGEGMFQHQTSV 480

  Fly   538 YH---------------PTPTSPTHQLYTNAVLNAPSALS----YSASG------WHNGS 572
            .|               |....|...|||:.|   |..||    :|..|      |...|
Mouse   481 AHQPVVRQCGPQTGLQSPGGLQPPEFLYTHGV---PRTLSPHQYHSVHGVGMVPEWSENS 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 90/200 (45%)
Tbx5XP_006530342.1 TBOX 72..260 CDD:238106 89/186 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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