DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and tbx-39

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_502851.1 Gene:tbx-39 / 190678 WormBaseID:WBGene00006558 Length:396 Species:Caenorhabditis elegans


Alignment Length:517 Identity:97/517 - (18%)
Similarity:178/517 - (34%) Gaps:142/517 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 NLRISLDDRELWLR-FQNLTNEMIVTKNGRRM-FPVVKISASGLDPAAMYTVLLEFVQIDSHRWK 148
            |:.::.:||  |.: :.|:  ||||...|.:: ||.:..:.:||:..:.|.|||...:.|:.|:.
 Worm     8 NVTMAEEDR--WKQWYPNM--EMIVNNKGPKLIFPELNFNITGLEEKSRYVVLLSIEKYDNIRYG 68

  Fly   149 YVNGEWVPGGKAEVPPSN---PIYVHPESPNFGAHWMKEPISFAKVKLTNK---TNGNGQIMLNS 207
            |.||:|.|..........   ..::||:....|...|||.|.|..|::||.   .:.:....:.:
 Worm    69 YRNGKWGPSKVRHATKKEQEIKYFLHPDGTKLGKELMKETIKFDTVRITNHKKFMDKDNVFFVET 133

  Fly   208 LHKYEPRVHLVRVGSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPDTL 272
            :|||.|.:.:..:.:.:....:......||..||.|..|.:.:.|.|::                
 Worm   134 MHKYVPVLTVKNITNVESANHSMRMEVAQFFPVTVYNQESIGNWKSKFH---------------- 182

  Fly   273 YPHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYGRS 337
              .::.||..:.                                       |.:...:.|.....
 Worm   183 --KNSTYGNRLD---------------------------------------GGNKRKNTDSSEER 206

  Fly   338 LSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSS 402
            .|.||...|........:|.|                      |:.....||::|.:...:||| 
 Worm   207 TSKRSKNETEIAVSDILQVAS----------------------QSENYNESTNSGRLQNEISSS- 248

  Fly   403 GGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYWNATSVPGPMPMNVCSGRN 467
               |...|||. :.:.|..: :.:|: :|...|..:.:.:....|.::..:....:..||     
 Worm   249 ---IHQFPSTS-YQNQYPHA-YPTVN-TPPIYVQQFTALFDEIHNQFDPKTKQNRVAKNV----- 302

  Fly   468 ISSHNSPSPTNGSPSYTTSSPSYTIH---HLTPHSHQYNMAQTDIYGTGVGVGGGAGTTGSPQAA 529
                          .|.:|.|.:.|:   ::..::..|.::|.                 ..|..
 Worm   303 --------------QYLSSVPQFAINQKENIHQNAPDYPVSQF-----------------PNQYP 336

  Fly   530 YGAAAHQVYHPTPTSPTHQLYTNAVLNAPSALSYSASGWHNGSGAEYGLYQNAAAAYYQPEY 591
            ||  ::..|:|...|.....:.|..:|..   .||.|.:.:...||...:.......:.|.|
 Worm   337 YG--SYPYYYPYFQSSQQFPHLNYSMNNS---IYSDSSFQSSFSAENSYFDENGNPIHYPYY 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 48/189 (25%)
tbx-39NP_502851.1 T-box 9..180 CDD:279278 46/174 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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