DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and tbx-30

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_500750.1 Gene:tbx-30 / 190419 WormBaseID:WBGene00006549 Length:308 Species:Caenorhabditis elegans


Alignment Length:178 Identity:45/178 - (25%)
Similarity:80/178 - (44%) Gaps:14/178 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 ISLDDRELWL-RFQNLTNEMIVTKNGRR---MFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKY 149
            :.:.:.|||. |:.|:  |||  .|.:|   :||.:|...|||:..:.|.::|...::|:.|:..
 Worm     9 VKMSNEELWKERYPNM--EMI--SNSKRITPIFPEIKFKISGLEENSRYVLVLSLEKMDNIRYGI 69

  Fly   150 -VNGEWVPGGKAEVPPSN--PIYVHPESPNFGAHWMKEPISFAKVKLTNK---TNGNGQIMLNSL 208
             .|.||.|....:..|.:  ..:.|||....|...|.|.:.|..|::|..   :.......::::
 Worm    70 NENKEWAPSSARKPKPHHNMKFFFHPEGTKLGKELMAETVEFTSVRITTSEKLSEKENVFYVHTM 134

  Fly   209 HKYEPRVHLVRVGSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYN 256
            |||.|.:.:..:.:.:.....:.....||..|:.||...:...|...|
 Worm   135 HKYVPVLTIRNLTTGEIASNIFKMEIAQFFPVSIYQQASMGRWKSDLN 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 45/178 (25%)
tbx-30NP_500750.1 T-box 9..190 CDD:279278 45/178 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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