DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and tbx-2

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001370674.1 Gene:tbx-2 / 175698 WormBaseID:WBGene00006543 Length:423 Species:Caenorhabditis elegans


Alignment Length:388 Identity:129/388 - (33%)
Similarity:180/388 - (46%) Gaps:107/388 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GGGAGGGAGSGSPQHVTHNGHGHGHGLGGVAAVSGGGASVSGNGGHRVVGGAGSPNELD---RNL 87
            |.|.||....|.|.::..:....|...|.|                      |||.|.|   .:.
 Worm    19 GAGVGGPGAGGPPPNLFFSMLQAGFPPGPV----------------------GSPPEDDGVTDDP 61

  Fly    88 RISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNG 152
            ::.||:||||.:|.....||::||:|||:||..::..||||..:.|.|:::.|..|.||:|:.|.
 Worm    62 KVELDERELWQQFSQCGTEMVITKSGRRIFPAYRVKISGLDKKSQYFVMMDLVPADEHRYKFNNS 126

  Fly   153 EWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEPRVH 216
            .|:..|||:......:|:||:||:.|.|||.:..:|.|:||||. ::.:|..:|||:|||:||:|
 Worm   127 RWMIAGKADPEMPKTLYIHPDSPSTGEHWMSKGANFHKLKLTNNISDKHGYTILNSMHKYQPRLH 191

  Fly   217 LVRVGSEQRHVV------TYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDA----KERPDT 271
            :||..  .||.:      |:.|.||:||||||||||:||.|||:.|||||.|.||    :|:...
 Worm   192 VVRCA--DRHNLMYSTFRTFVFRETEFIAVTAYQNEKVTELKIENNPFAKGFRDAGAGKREKKRQ 254

  Fly   272 LYPHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYGR 336
            |:..:                ..|..:||        |..||.|:    .|..||...|.|.   
 Worm   255 LHRMN----------------GDATQSPP--------GKTASLPT----HSPHPSESNSEDD--- 288

  Fly   337 SLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVS 399
                   .||                      .....|:|   .||||      |.|:|||.:
 Worm   289 -------EPT----------------------LKKCKPEP---SQTPT------TSSLSTSTT 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 88/192 (46%)
tbx-2NP_001370674.1 T-box_TBX2_3-like 59..243 CDD:410314 86/185 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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