DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and sea-1

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_494611.1 Gene:sea-1 / 173710 WormBaseID:WBGene00004750 Length:376 Species:Caenorhabditis elegans


Alignment Length:204 Identity:53/204 - (25%)
Similarity:97/204 - (47%) Gaps:28/204 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVN 151
            ::|||.::|.|.:|..:..||:|..:|||:||::....|||||..:|...:..:...:::.:|.:
 Worm   167 VKISLANQEQWAKFHEIGTEMMVFNSGRRLFPLLAYKVSGLDPHKLYCAGVHMIPDSAYKQEYDH 231

  Fly   152 G--EWV---PGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTN---------------K 196
            .  :||   ...|....|::.|....|:   |...|...|..:.||:.|               |
 Worm   232 DLQQWVNCLNQKKTIFKPTSEILGRIEN---GFKLMSLGIDMSDVKIFNIAIRKKTPLQIEKSRK 293

  Fly   197 TNGNGQIMLNSLHKYEPRVHLVRV---GSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPF 258
            .|.:..|.:...:||.|.:.:..:   |.|::.:....||||.|:.|:.|:|:::..:|...|.:
 Worm   294 PNLDKTIEVLIQYKYLPVIKIYELSNSGMEKKEIAQATFPETSFVTVSIYRNQKIKEMKTLGNKY 358

  Fly   259 AKAFLDAKE 267
            .:.  |.|:
 Worm   359 CRT--DRKQ 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 53/204 (26%)
sea-1NP_494611.1 TBOX 167..369 CDD:214656 53/204 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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