DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and tbx19

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:XP_003198807.1 Gene:tbx19 / 100538180 ZFINID:ZDB-GENE-110411-5 Length:436 Species:Danio rerio


Alignment Length:489 Identity:192/489 - (39%)
Similarity:237/489 - (48%) Gaps:120/489 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GGASVSGNGGH-------------RVVGGAGSPNELDRNLRISLDDRELWLRFQNLTNEMIVTKN 112
            ||...||.||:             .:..|....:..::.|::||:|.|||.:|:.:|||||||||
Zfish    10 GGTVSSGRGGNDCCITRLLSVVESELQAGREKGDPTEKQLKVSLEDAELWRKFKEVTNEMIVTKN 74

  Fly   113 GRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNGEWVPGGKAEVPPSNPIYVHPESPNF 177
            |||||||:|:|.:||||.|||:.||:|...|.||||||||||||.||.|....:.:|:||:||||
Zfish    75 GRRMFPVLKVSVTGLDPNAMYSFLLDFTPADGHRWKYVNGEWVPAGKPEPHSHSCVYIHPDSPNF 139

  Fly   178 GAHWMKEPISFAKVKLTNKTNGNGQIMLNSLHKYEPRVHLVRVGSEQRHVVTYPFPETQFIAVTA 242
            ||||||.|:||.|||||||.||.|||||||||||||::|:||||...|.|....|.:||||||||
Zfish   140 GAHWMKAPVSFNKVKLTNKLNGGGQIMLNSLHKYEPQIHIVRVGGSHRMVTNISFTDTQFIAVTA 204

  Fly   243 YQNEEVTSLKIKYNPFAKAFLDAKER--------PDTLYPH--DTHYGWLIPPPTHYTAAAAA-V 296
            |||||:|:||||:|||||||||||||        |.....|  ..|.||.|..|....:|:.. .
Zfish   205 YQNEEITALKIKHNPFAKAFLDAKERSHPKNHLEPPVENQHMGIPHCGWFISNPDSLCSASGGNF 269

  Fly   297 AAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYSRP------- 354
            ..|..|.:...|......||:                :|.          |..||..|       
Zfish   270 PYPGGLPLTHHHHGYKHYPSL----------------HGH----------RAAPYPSPYLPRHHH 308

  Fly   355 ---RVVSGS-----GSNGSAGNASSTSPQPPS---------APQTP--TSLHSTSTGSVSTSVSS 400
               ..||.|     |....:|:.|.|...||.         ||.:|  :|.:.......|.:|||
Zfish   309 RGHNTVSLSDNLSPGVQMFSGHESWTGVSPPGPAAMLSMQPAPNSPGASSQYPCLWTVSSCTVSS 373

  Fly   401 SSGGGIGS------APSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYWNATSVPGPMP 459
            |..||:.|      .|:.|.           |..|||.:.:.::                 ||  
Zfish   374 SPPGGVVSLTHGQDEPADGA-----------STSASPCSLLQAH-----------------GP-- 408

  Fly   460 MNVCSGRNISSHNSPSPTNGSPSYTTSSPSYTIH 493
                    ..|..|..|.|.|.....|..|.|.|
Zfish   409 --------TGSDGSVDPANHSRVGGMSWASVTTH 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 127/181 (70%)
tbx19XP_003198807.1 TBOX 48..230 CDD:238106 127/181 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 288 1.000 Domainoid score I1535
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 311 1.000 Inparanoid score I2575
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 1 1.000 - - FOG0002920
OrthoInspector 1 1.000 - - otm26035
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.930

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