DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and tbx3b

DIOPT Version :9

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:XP_002662050.2 Gene:tbx3b / 100334188 ZFINID:ZDB-GENE-060531-144 Length:594 Species:Danio rerio


Alignment Length:525 Identity:142/525 - (27%)
Similarity:221/525 - (42%) Gaps:93/525 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 ISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNGE 153
            :.|:..|||.:|..:..||::||:||||||..|:..||.|..|.|.:|::.|..|.:|:|:.|..
Zfish    74 VHLEGNELWGQFHKVGTEMVITKSGRRMFPAFKVRCSGFDRKARYILLMDIVASDDYRYKFHNCR 138

  Fly   154 WVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEPRVHL 217
            |:..|||:......:|:||:||:.|..||.:.::|.|:||||. ::.:|..:|||:|||:||.|:
Zfish   139 WMVAGKADPEMPKRMYIHPDSPSTGEQWMSKAVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHI 203

  Fly   218 VRVGSEQR----HVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDA-----KERPDTLY 273
            ||.....:    ...||.||||:||||||||||::|.|||..|||||.|.:.     ::|...| 
Zfish   204 VRANDVLKLPYSTFKTYVFPETEFIAVTAYQNEKITQLKIDNNPFAKGFRETGNGRREKRKQML- 267

  Fly   274 PHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYGRSL 338
                |....:.|     ..|:.:..........|:.|:.....|:|..:  .::....|.:|...
Zfish   268 ----HQRCEVEP-----KKASVLTDDSSFDQISSNYLIQESNVVTSTST--DTNESDIDGFGDEK 321

  Fly   339 SSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSSG 403
            .|..|          ..:.|.|....::...|:|..:....|       :...|..:..::|...
Zfish   322 ESNEV----------ESIQSISQDEQNSREISTTVQESKDDP-------NEEIGDRNPEINSKKQ 369

  Fly   404 GGIGSAPSTGCFSSSYAQSGFMS--VDASPTASV---FSYPSSWQSNGNYWNATSVPGPMPMNVC 463
            ..:..............|..|.:  .|||...|:   |.:|:.     ...|:..:|..:..|:|
Zfish   370 HSVEQPAHLPLDKKHAEQQKFAADVTDASQKDSLARHFYFPTP-----GLINSLRLPSHVLSNLC 429

  Fly   464 ---------------SGRNISSHNSPSPTNGSPSYTTSSPSYT-----IHHLTPHSHQYNMAQTD 508
                           :|..|...::.....|   ||||..|..     :..|.|:..|:.|.   
Zfish   430 QFNYVGTLPLLASEATGSWIPRRSNEGEGQG---YTTSVSSSQQRLTGMQDLPPNFQQHRMT--- 488

  Fly   509 IYGTGVGVGGGAGTTGSPQ-------AAYGAAAHQVYHPTPTSPTHQLYTNAVLNAPSALSYSAS 566
              ..||.|.........||       .:..||::||:        .|.:.| :...|....|...
Zfish   489 --SQGVLVSAQGNIFPYPQDYMTTSAGSSSAASYQVH--------RQPFFN-ISYRPQCRPYPVP 542

  Fly   567 GWHNG 571
            .|.:|
Zfish   543 VWVHG 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 TBOX 86..268 CDD:238106 83/188 (44%)
tbx3bXP_002662050.2 TBOX 74..256 CDD:238106 83/181 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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