DRSC/TRiP Functional Genomics Resources

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Protein Alignment byn and mga

DIOPT Version :10

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:XP_012824488.2 Gene:mga / 100038161 XenbaseID:XB-GENE-492360 Length:3054 Species:Xenopus tropicalis


Alignment Length:447 Identity:119/447 - (26%)
Similarity:186/447 - (41%) Gaps:120/447 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 NLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYV 150
            |:.::||:..:|..|...:.||::||.||||||..:...|||||...|.::::...:|:||:|: 
 Frog    75 NITVTLDNNNMWNEFYRCSTEMVLTKQGRRMFPYCRYWISGLDPYQKYILVMDISPMDNHRYKW- 138

  Fly   151 NGE-WVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEP 213
            ||: |..|||:|......:::|||||:.|.:||.:|:||.|:||||. .:..|.|:|:|:|:|.|
 Frog   139 NGKWWEAGGKSEPHVLGRVFIHPESPSTGQYWMHQPVSFYKLKLTNNILDQEGHIILHSMHRYLP 203

  Fly   214 RVHLVRVGSEQR-------HVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPDT 271
            |:|:|.......       .|.|:.||:|:|||||||||.::|.|||..|||||.|.:       
 Frog   204 RLHVVPANQSTEVIQLNGPDVHTFTFPQTEFIAVTAYQNFQITQLKIDCNPFAKGFRE------- 261

  Fly   272 LYPHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGGSCDRYGR 336
                                   ......|:..|:|..      |....:|.||......:...|
 Frog   262 -----------------------GAMTGKPVKEAKSKN------SDQENDSQGPQPHNDSESILR 297

  Fly   337 SLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSS 401
             |.....||..:...:.|...:......:..::..::|..|...              |..::|.
 Frog   298 -LRELFRAPENSDGETDPEAFNAEHDFFNCKDSRLSNPDTPRIQ--------------SDGLNSP 347

  Fly   402 SGGGIGSAPSTGCFSSSYAQSGFMSV---------------DASPTASVFSYPSSWQSNGNYWNA 451
            :..||||:||.   :||....|..::               ...||.::                
 Frog   348 AQTGIGSSPSV---ASSLDPKGQPNIVIKEEPVDDYDYDYGKEQPTGAI---------------- 393

  Fly   452 TSVPGPMPMNVCSGRNISSHNSPSPTNGSPSYTTSSPSYTI--HHLT-----PHSHQ 501
                           |:...:....|:   .|:.|...|.|  .|.:     |||.:
 Frog   394 ---------------NVKQESEEEETD---EYSNSDDEYPILERHFSQFRKQPHSER 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 T-box_TBXT_TBX19-like 87..264 CDD:410318 81/185 (44%)
mgaXP_012824488.2 T-box_MGA-like 76..261 CDD:410321 81/185 (44%)
MGA_dom 996..1035 CDD:464998
DUF5585 1534..1923 CDD:465521
PTZ00341 <1915..2276 CDD:173534
bHLH_SF 2475..2539 CDD:469605
Blue background indicates that the domain is not in the aligned region.

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