DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment byn and tbx5b

DIOPT Version :10

Sequence 1:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001185700.1 Gene:tbx5b / 100004161 ZFINID:ZDB-GENE-060601-2 Length:422 Species:Danio rerio


Alignment Length:401 Identity:137/401 - (34%)
Similarity:191/401 - (47%) Gaps:76/401 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 AVSGGGASV--------SGNGGHRVVGGAGSPNELDR----NLRISLDDRELWLRFQNLTNEMIV 109
            |.|||.:..        ||:.|....|......:|.:    .:::.|.:::||.:|.::|.|||:
Zfish    11 ACSGGNSPAMDFERDKDSGHHGRNKTGSPPLQTQLSQQSMEGIKVYLHEKDLWAKFHDVTTEMII 75

  Fly   110 TKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNGEWVPGGKAEVPPSNPIYVHPES 174
            ||.||||||..|:..:||:|.|.|.:|::.:..|.||:|:.:.:|...||||......:||||:|
Zfish    76 TKAGRRMFPSYKVKVTGLNPKAKYILLMDIISADEHRYKFADNKWSISGKAEPAIPGRLYVHPDS 140

  Fly   175 PNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEPRVHLVRV------GSEQRHVVTYPF 232
            |..|||||::.:||.|:||||. .:..|.|:|||:|||:||:|:|:.      ||......|:.|
Zfish   141 PASGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADERNSFGSSNTSFCTHSF 205

  Fly   233 PETQFIAVTAYQNEEVTSLKIKYNPFAKAF-------LDAKER-PDTLYPHDTHYGWLIPPPTHY 289
            .||.|||||:|||..:|.|||:.|||||.|       |....| |...||       |:|..|  
Zfish   206 AETTFIAVTSYQNHTITQLKIENNPFAKGFRGNDDIELHRMSRTPSKEYP-------LVPRST-- 261

  Fly   290 TAAAAAVAAPP-PLSIAQSHGLVASCPSVSSAESVGPSSGGSC-DRYG-RSLSSRSVAPTRTTP- 350
               |...|||| |..:::|...|..          .||.|.:| |..| :||:........|.| 
Zfish   262 ---ARQRAAPPSPDCLSRSEYTVTQ----------KPSPGFTCSDTSGDQSLTETPSIHDPTYPL 313

  Fly   351 --YS-RPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPST 412
              |. .|.|...|        ..:|..||.....:...:......|.|.|.:..|          
Zfish   314 FSYQLSPDVAPSS--------MDTTQHQPCMYGGSQVGMEELRWASYSDSTTYQS---------- 360

  Fly   413 GCFSSSYAQSG 423
              |||:...||
Zfish   361 --FSSAKEMSG 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bynNP_524031.2 T-box_TBXT_TBX19-like 87..264 CDD:410318 86/190 (45%)
tbx5bNP_001185700.1 T-box_TBX4_5-like 53..237 CDD:410315 86/183 (47%)

Return to query results.
Submit another query.