DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdhAL and SdhA

DIOPT Version :10

Sequence 1:NP_648523.1 Gene:SdhAL / 39348 FlyBaseID:FBgn0036222 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_311518.5 Gene:SdhA / 1272618 VectorBaseID:AGAMI1_012103 Length:659 Species:Anopheles gambiae


Alignment Length:613 Identity:401/613 - (65%)
Similarity:491/613 - (80%) Gaps:3/613 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EYSLIDHKFDAIVIGAGGAGMRAGFGLAEKGFQTAIISKLFPTRSHTVAAQGGVNAALSNMDKDD 103
            ||.::||.:||:|:||||||:||.|||..:||:||:|:|||||||||||||||:||||.||::||
Mosquito    50 EYPVVDHTYDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDD 114

  Fly   104 WKYHFYDTVKGSDWLGDQNAIHYMCREAERAVCELDMYGMPFSRKPDGKIYQRPFGGQTLDYGKG 168
            ||:|.|||||||||||||:|||||.|||.:||.||:.|||||||.||||||||.||||:|.||||
Mosquito   115 WKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTPDGKIYQRAFGGQSLKYGKG 179

  Fly   169 GVARRACACADRTGHALIHTLYGQTLKHSDSCHYFVDYFVLDLIMSQGACVGCLAWKLDDGTFHR 233
            |.|.|.|..||||||:|:||||||:|.:  .|:||::||.:||:|..|.|||.:|..|:||:.||
Mosquito   180 GQAHRCCCVADRTGHSLLHTLYGQSLSY--DCNYFIEYFAMDLLMQNGECVGVIAMNLEDGSIHR 242

  Fly   234 FLAKNTVVAAGGCGRVYFSTTAGHTCTGDGNAWVSRQELPLMDMEFVQFHPTGIYGAGCLITEGV 298
            |.|||||:|.||.||.|||.|:.|||||||.|.|:|..||..|:||||||||||||||||||||.
Mosquito   243 FRAKNTVLATGGYGRAYFSCTSAHTCTGDGTAMVARAGLPSEDLEFVQFHPTGIYGAGCLITEGC 307

  Fly   299 RGEGGFFLNCKGERFMERYAPKAKDLASRDVVARAMTMEVLAGNGCGPLKDHVHLQLHHIDAKII 363
            |||||:.:|.:||||||||||.||||||||||:|:||:|:..|.||||.||||:|||||:..:.:
Mosquito   308 RGEGGYLINSQGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPPEQL 372

  Fly   364 KQRLPGIMVTARIFAKVDVTKEPVPVLPTVHYNMGGIPTDYKGRVVTIDENGKEQVVKGLYSCGE 428
            .||||||..||.|||.||||:||:||||||||||||:||:|||:|:| .|||.::||.|||:|||
Mosquito   373 AQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGVPTNYKGQVLT-TENGADRVVPGLYACGE 436

  Fly   429 TSCASVHGANRLGANSLLDLIIFGRVCALDIAANNCPGDKPPQVEDKATEKSLDNFKRLRCADGC 493
            .:|:||||||||||||||||::|||.||..||..|.||:|...::..|.|.|:.|...:|.|||.
Mosquito   437 AACSSVHGANRLGANSLLDLVVFGRACAKTIAEENRPGEKVQDLKPNAGEASVANLDWVRNADGQ 501

  Fly   494 IPTAVLRMELQRTMTKHAAVFREGKLLKEGLLKVAELCEQFKDIKTTDRTMVWNSNLVETLELQN 558
            :||:.||:.:|:||..|||||||.|.|:||:.|:.::.:..||:|.:||::||||:|||||||||
Mosquito   502 VPTSTLRLNMQKTMQTHAAVFREEKTLQEGVRKMGDIYKTIKDVKVSDRSLVWNSDLVETLELQN 566

  Fly   559 MLANAVHIITAMENRKESRGSHAREDFKTRVDELDYGAPLAGQKKKPFEEHWRKHTMTFALGNKG 623
            :|.||...|.|.||||||||:|||||:|.||||.|:..||.||:|||.||||||||:|:.....|
Mosquito   567 LLLNANMTIVAAENRKESRGAHAREDYKQRVDEYDFSKPLEGQQKKPVEEHWRKHTLTWIDPATG 631

  Fly   624 CASIKYRPVVDTTLDSSVAPIPPAPRTY 651
            ..:|.||||:|.||....|.:|||.|:|
Mosquito   632 NVTIDYRPVIDETLSEECATVPPAIRSY 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdhALNP_648523.1 FAD_binding_2 37..651 CDD:481218 400/611 (65%)
SdhAXP_311518.5 None

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