DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11588 and Pdia3

DIOPT Version :9

Sequence 1:NP_001261729.1 Gene:CG11588 / 39347 FlyBaseID:FBgn0036221 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_059015.2 Gene:Pdia3 / 29468 RGDID:68430 Length:510 Species:Rattus norvegicus


Alignment Length:144 Identity:33/144 - (22%)
Similarity:54/144 - (37%) Gaps:41/144 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SSYLMAEYGDGLITRIDEGNWKEVL--TGEWLLLICSSHQPSCGDWK--AVLYQLASTSMGCLDV 99
            :|.|:|...|  :..:.:.|::..:  ||...|::.....|.||..|  |..|:.|:|.:..: |
  Rat    22 ASALLASASD--VLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI-V 83

  Fly   100 DLAFGDLSTN------FWLRG--RFSAFR---EANVY---HVVDG-------------------- 130
            .||..|.:.|      :.:.|  ....||   ||..|   ...||                    
  Rat    84 PLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTED 148

  Fly   131 EFRRLSSSHDTNSI 144
            ||::..|..|.:.:
  Rat   149 EFKKFISDKDASVV 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11588NP_001261729.1 Thioredoxin_like 51..148 CDD:294274 29/132 (22%)
Pdia3NP_059015.2 ER_PDI_fam 31..492 CDD:273457 30/135 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..510
Prevents secretion from ER 507..510
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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