DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5897 and Gasp

DIOPT Version :10

Sequence 1:NP_001356901.1 Gene:CG5897 / 39346 FlyBaseID:FBgn0036220 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster


Alignment Length:220 Identity:48/220 - (21%)
Similarity:73/220 - (33%) Gaps:57/220 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GYIGDPSDCQAWGYCQDNKLIDRRSCTEGLLYSFRDG-----TCKRASDTICHSQLSEICASLEP 95
            |:....:.|..:..| ||.:.:.::|..||.:...|.     .|....:..|..:     ..|||
  Fly    28 GFYPHDTSCDKYWKC-DNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDCGDR-----TELEP 86

  Fly    96 ----------WNYVANPADCRRFVKCADLDDPTWGDCGVGQVFSNKKQTCL----------EEVA 140
                      :....:...|..|..|.: .:|:...|..|..:....:.|:          ||||
  Fly    87 PITTPHCSRLYGIFPDENKCDVFWNCWN-GEPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVA 150

  Fly   141 ---GCPQDNICSHMKDGSFVGDPKSCQIYYKCHNGFGTMLNCSVGRYF----NRKTGNCQSWMPH 198
               .||.....::....|....|:.|:.||.|..|......|.:|..|    :..||||:     
  Fly   151 NGFSCPAAGELANAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDSDGTGNCE----- 210

  Fly   199 YCSKDDEDNILTPPSTDHNICSKYY 223
                |.||    .|.     |..||
  Fly   211 ----DPED----VPG-----CEDYY 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5897NP_001356901.1 ChtBD2 146..192 CDD:214696 12/49 (24%)
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 10/44 (23%)
CBM_14 97..144 CDD:426342 7/47 (15%)
CBM_14 170..218 CDD:426342 17/65 (26%)

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