DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5897 and obst-E

DIOPT Version :9

Sequence 1:NP_001356901.1 Gene:CG5897 / 39346 FlyBaseID:FBgn0036220 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_723116.1 Gene:obst-E / 33806 FlyBaseID:FBgn0031737 Length:249 Species:Drosophila melanogaster


Alignment Length:260 Identity:48/260 - (18%)
Similarity:82/260 - (31%) Gaps:98/260 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CKLWAGTGYIGDP------------SDCQAWGYCQDNKLIDRRSCTEGLLYSFR---DGTCKRAS 78
            |....|:..:|.|            ..|.::..|||...:: :.|.:|||:..|   .|.|..|.
  Fly    11 CVAMFGSMALGSPECPTPNGRFASGDQCDSYTECQDGTPVE-KLCPDGLLFHQRTKATGECTYAP 74

  Fly    79 DTICHSQLSEICASLEPWNYVANPADCRRFVKCADLDDPTWGDCGVGQVFSNKKQTCLEEVAGCP 143
            .:.|..:     |.|:|                                 :|..:.|..:....|
  Fly    75 YSTCKER-----ARLQP---------------------------------ANGTEECPRQFGFYP 101

  Fly   144 QDNICSHMKDGSFVGDPKSCQIYYKCHNGFGTMLNCSVGRYFNRKTGNC-----------QSWMP 197
            .             ||...|.:|..|.:|..::..|..|..||.:|..|           ::::.
  Fly   102 N-------------GDATKCGVYRNCAHGVASLTKCPEGLAFNEETYQCDWPDLVESCNAEAYLG 153

  Fly   198 HYC----SKDDEDNILTPPSTDHNICSKYYQRDRDGVQLLPDLMTCYGYYSCTS----QFDVGKW 254
            ..|    |.||........|.:..:  :||:..:          ||..|:.|.:    .::.||:
  Fly   154 FNCPAADSADDSAAAAVDVSPEGEL--RYYRHPQ----------TCKKYFVCVNGHPRLYNCGKY 206

  Fly   255  254
              Fly   207  206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5897NP_001356901.1 ChtBD2 146..192 CDD:214696 11/45 (24%)
obst-ENP_723116.1 ChtBD2 23..65 CDD:214696 10/42 (24%)
CBM_14 95..146 CDD:307643 13/63 (21%)
CBM_14 180..225 CDD:307643 8/37 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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