DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5897 and cbd-1

DIOPT Version :10

Sequence 1:NP_001356901.1 Gene:CG5897 / 39346 FlyBaseID:FBgn0036220 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:402 Identity:81/402 - (20%)
Similarity:116/402 - (28%) Gaps:139/402 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DCQAWG---------------YCQDNKLIDRRSCTEGLLYSFRDGTCKRASDTICHSQLSEICAS 92
            |||.:.               :|..|.:....:|..|..:   |.|.:..|:| |....:.:..:
 Worm   568 DCQQYTTPTFLTFGDCFDQFIFCSGNGINRMAACPIGETF---DKTLRSCSET-CGVSTTIVAVT 628

  Fly    93 L---------EPWNYVANPADCRRFVKCADLDDPTWGD------------CGVGQVFSNKKQTCL 136
            :         .|..|:.|.....:         .||.|            ....|..||.    :
 Worm   629 IGTQTSDDLSAPSEYIENDGVTTQ---------STWNDQPSTTQAPNSYESYTTQYSSND----V 680

  Fly   137 EEVAGCPQDNICSHMKDGSFVGDPKSC-QIYYKCHNGFGTMLNCSVGRYFNRKTGNC--QSWMPH 198
            ...:..|..:.||....|.|   ...| |.|.:|.||...:..|....|||..|..|  :..:|.
 Worm   681 PSTSAAPIGDRCSLDASGLF---SLGCSQKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPE 742

  Fly   199 YCSKDDEDN-ILTPPSTDHNICSKYYQRDRDGVQL----------------LPDLMTCYGYYSCT 246
            ..|:....: ::|.|..|.:  |.||....|.|..                |.||.....|..|:
 Worm   743 CGSQGSTSSPVITTPGQDQS--SNYYGIPSDDVPSTTQTPVGDRCAYVASGLFDLGCSQKYIQCS 805

  Fly   247 SQFDVGKWSSCPWGLHFEWWSQRC-----------------------------GSP-KDNSCSY- 280
            .  .......|...|:|:..||.|                             .|| :|...:| 
 Worm   806 D--SAASVRECEGSLYFDERSQSCRFRDEVFKCQTADVSSSSTVPYLDFTTTPASPSEDEPTTYE 868

  Fly   281 ---------------DRCANRNQLMVATINTGCREF-TICQDNRSKSSQKCPEDYPY-------- 321
                           |.|.:   |...|..|||..| .:|...|..||..|.....|        
 Worm   869 PSVAPYIPSVTVNPVDTCTS---LSDGTHGTGCSSFYFVCSHGRLISSGNCQLGEGYDPSVQGCR 930

  Fly   322 -FNELLRQCTDE 332
             |:|:..:..||
 Worm   931 TFSEIPARACDE 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5897NP_001356901.1 ChtBD2 146..192 CDD:214696 15/46 (33%)
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696
ChtBD2 191..237 CDD:214696
CBM_14 692..743 CDD:426342 17/53 (32%)
CBM_14 785..836 CDD:426342 11/52 (21%)
CBM_14 1108..1161 CDD:426342
CBM_14 1182..1235 CDD:426342
CBM_14 1251..1296 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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