DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5897 and cpg-2

DIOPT Version :10

Sequence 1:NP_001356901.1 Gene:CG5897 / 39346 FlyBaseID:FBgn0036220 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 / 175991 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans


Alignment Length:243 Identity:43/243 - (17%)
Similarity:75/243 - (30%) Gaps:93/243 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 DNICSHMKDGSFVGDPKSCQIYY-KCHNGFGTMLNCSVGRYFNRKTGNCQSW--MPHYCSKDDED 206
            :|:|.:::||::  ....|..|| .|.......|:|....:::..:..| .|  :...|.   ||
 Worm   135 ENVCENLEDGAY--SSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKC-IWKSLVEECK---ED 193

  Fly   207 NILTPPSTDHN-----------------------------------------ICSKYYQRDRDGV 230
            ..:|..|.:.:                                         .|    :...||:
 Worm   194 LTITDGSGETSGEGSGEASGEASGEGSGEASGESSGQGSGEASGEGSGELEPTC----EGKADGI 254

  Fly   231 QLLPDLMTCYGYYSCTSQFDVGKWSSCPWGLHFEWWSQRCGSPKDNSCSYDRCANRNQLMVATIN 295
            .  |:.:....:.:|:.  .:.:...||..|.|......|..|:|.:    .||.     :.|..
 Worm   255 H--PNGVCSTNFLTCSG--GIARIMDCPASLVFNPTILVCDWPRDVA----ECAG-----LPTPQ 306

  Fly   296 TGCRE------------FTICQDNR------------SKSSQKCPEDY 319
            ..|.|            ||.|.:.|            |:|:.:|  ||
 Worm   307 PTCEEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRC--DY 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5897NP_001356901.1 ChtBD2 146..192 CDD:214696 10/46 (22%)
cpg-2NP_498551.3 CBM_14 24..76 CDD:426342
CBM_14 138..190 CDD:426342 11/54 (20%)
ChtBD2 245..293 CDD:214696 10/55 (18%)
CBM_14 311..359 CDD:426342 10/44 (23%)
CBM_14 403..454 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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