DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sprn and ccdc181

DIOPT Version :9

Sequence 1:NP_001163425.2 Gene:Sprn / 39344 FlyBaseID:FBgn0036218 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_001122012.1 Gene:ccdc181 / 566663 ZFINID:ZDB-GENE-060503-312 Length:497 Species:Danio rerio


Alignment Length:506 Identity:102/506 - (20%)
Similarity:175/506 - (34%) Gaps:152/506 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ETFSSEESQASDCNQPLDVQSPKLTTNIEESFKVDCKLSLNTLLSPINITDP----LRKQIDFQC 86
            |..:|...|..|  :.||.:...:...|:|:.|            .:...||    .|:::.|:.
Zfish    90 ELITSPHLQNDD--EDLDDEKKYILDKIQEANK------------QLQDQDPPDQMRRRRLQFKD 140

  Fly    87 KLGDLSFFGPVMCSISEFNKEEQTMEPYFIQELDMACAGQ----EVEQVAEENVFETGPQ----- 142
            .|.||      :....||:.:|..:..:...|.:...:||    .:.| .|||..:.||:     
Zfish   141 TLVDL------VVPAHEFDAQESNIASFGDVEEEQEVSGQMQRLRISQ-REENQNKDGPEDEHNE 198

  Fly   143 -------------------LKLPENQPINDSITTETNETK---LPSTEALNVLNLAEFSEPVMEK 185
                               ||..|:|.:...:....|:.:   |..||:...||          |
Zfish   199 GGKEGRVLIEKDGKFDLVSLKEVESQGLLPPLPVSHNDNQRAPLRQTESGQHLN----------K 253

  Fly   186 SNISIEEVNLTGAEEINEPISDEPNSQLVESAAKLQPKSLGIQIPPLQIEDLISPLVEQPKIATK 250
            |.:|....|||         |..|.|.          :||.|..||.:..:       :|..|..
Zfish   254 SPVSSPRQNLT---------SPFPPSN----------ESLYIPKPPPKHRN-------RPSSARP 292

  Fly   251 LGVISFLTGNKLAL-----TPSVRLSFGDRVTTRTNKKSKEI---VQQQASKALKALISVFTMQR 307
            ....:::.|.|..:     .||       ..|...:.:.||:   :||:..:..|.    ..|::
Zfish   293 SQRGTWVQGTKRRVQSANGAPS-------HATFTLSPQQKELLAKLQQRRERQAKE----DEMKK 346

  Fly   308 RLEASQCDNSNNSR-----SKRFEQLKSSLTFSRVFRQNIFQPTSKIESRQQNTDANSLESGEPN 367
            |.|..|....|...     .::.|||   |...||.:.   |...::..|:        :.|:|.
Zfish   347 REEEEQKRQENEIAFQSWLMRKREQL---LEERRVHKA---QEMERMSCRR--------DCGDPE 397

  Fly   368 FKSTSAYKEPLPIPYRQDAGEGLTCNGLNVSKDSVFSEVSESDVSETHNKLFAMKKTQEGLSSTR 432
                .|:|..|.....|...:....:...:.|||.|...|..:..:...:....|::::     |
Zfish   398 ----EAFKIWLQKKQEQQFKDKQLEDMKRLEKDSGFCLHSREESEKAFRQWLRRKRSEK-----R 453

  Fly   433 SIGELSNILNNGRVLFSQPVR----LFC-FNKLKEWKRQGKVPRFHESPYR 478
            :..:|:...:...:|..:..|    |.| .|::|.:       ||.: |||
Zfish   454 AEHQLARERSRRLMLEERRARRMHDLLCTVNEIKPF-------RFSD-PYR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SprnNP_001163425.2 PH-like 446..562 CDD:302622 11/38 (29%)
ccdc181NP_001122012.1 Mpp10 18..>227 CDD:281935 32/157 (20%)
DUF4207 <360..476 CDD:290615 24/138 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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