DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and AT5G43140

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_568621.1 Gene:AT5G43140 / 834331 AraportID:AT5G43140 Length:254 Species:Arabidopsis thaliana


Alignment Length:171 Identity:38/171 - (22%)
Similarity:71/171 - (41%) Gaps:9/171 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FSPKYLLFTNIGISVGLSMVGDTMEQSYERLIGELPDWNRTRTIRMGISGLT-VGLVCHYWYQHL 85
            |..|.:..:.|.::..|:....|||.:        ..::..||.||...||. :|...|.|:.:|
plant    91 FMTKSITTSVIYMAADLTSQMITMEPT--------GSFDLIRTARMASFGLIFLGPSQHLWFSYL 147

  Fly    86 DYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEIREKALVLYAAEWTVW 150
            ..:.|||.......||::.|.:..|....||:...|.|:....||:...::...|.........|
plant   148 SKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVARLKRDLLPTLKNGLMYW 212

  Fly   151 PLAQFINFLLIKPQYRVFYDNTISLGYDIYTSQVKYRKKPE 191
            |:..|:.|..:....:...:::.:..:.||.:.:..:.|.:
plant   213 PVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMANQTKAD 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 11/60 (18%)
AT5G43140NP_568621.1 Mpv17_PMP22 183..243 CDD:461182 10/59 (17%)

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