DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5906 and AT3G24570

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_189100.1 Gene:AT3G24570 / 822053 AraportID:AT3G24570 Length:235 Species:Arabidopsis thaliana


Alignment Length:138 Identity:42/138 - (30%)
Similarity:60/138 - (43%) Gaps:9/138 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DWNRTRTIRMGISGLTVGLVCHYWYQHLDYLF-------PKRTYKVVVVKILLDQFICSPFYIAV 115
            :|.|.....|...|. ||.|.|:||:.||...       ||.| :.|..|:.:|..|..|..:.|
plant    76 NWKRVAITSMFGFGF-VGPVGHFWYEGLDKFIKLKLRYVPKST-RFVAAKVAMDGLIFGPVDLLV 138

  Fly   116 FFLTMAILEDNTWEELEQEIREKALVLYAAEWTVWPLAQFINFLLIKPQYRVFYDNTISLGYDIY 180
            ||..|.........|:::.::...|...|.|...|||.|..||..:..||::.|.|...|....:
plant   139 FFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQLLYVNIFCLVDSAF 203

  Fly   181 TSQVKYRK 188
            .|.|:.:|
plant   204 LSWVEQQK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 15/60 (25%)
AT3G24570NP_189100.1 Mpv17_PMP22 144..205 CDD:461182 15/60 (25%)

Return to query results.
Submit another query.