DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and PXMP2

DIOPT Version :9

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_061133.1 Gene:PXMP2 / 5827 HGNCID:9716 Length:195 Species:Homo sapiens


Alignment Length:174 Identity:41/174 - (23%)
Similarity:77/174 - (44%) Gaps:18/174 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KYLLF-------TNIGISVGLSMVGDTMEQSYERLIGELPDWNRTRTIRMG------ISG-LTVG 75
            :||||       |....|..||.:|:.:.|..|:...:    ..:|::.:|      :.| ...|
Human    24 QYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKK----ENSRSLDVGGPLRYAVYGFFFTG 84

  Fly    76 LVCHYWYQHLDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEIREKAL 140
            .:.|::|..:::..|.......:.::|||:.:.:|.::.:|||.|..||.........::|....
Human    85 PLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKMRGGFW 149

  Fly   141 VLYAAEWTVWPLAQFINFLLIKPQYRVFYDNTISLGYDIYTSQV 184
            ......|.||...||||...:..::||.:.|..:|.:..|.:.:
Human   150 PALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLASL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 122..185 CDD:282035 15/63 (24%)
PXMP2NP_061133.1 Mpv17_PMP22 131..193 CDD:282035 15/61 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1944
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1324608at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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