DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and CG1662

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_572883.1 Gene:CG1662 / 32296 FlyBaseID:FBgn0030481 Length:245 Species:Drosophila melanogaster


Alignment Length:214 Identity:104/214 - (48%)
Similarity:138/214 - (64%) Gaps:27/214 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ALRVLWRRMTNA---------------------------MDRFHQIAFSPKYLLFTNIGISVGLS 39
            :||:.|.|.::|                           :..:|..|||.::|||||:|||:.||
  Fly    23 SLRMSWPRNSSATGGAGGAAPGGGSSTTTSTIGFGALQKLREWHASAFSSRFLLFTNVGISLTLS 87

  Fly    40 MVGDTMEQSYERLIGELPDWNRTRTIRMGISGLTVGLVCHYWYQHLDYLFPKRTYKVVVVKILLD 104
            .|||.:||..|...||:..:..|||..|.|||:|||::|||||:.||...|.||.:||..||:||
  Fly    88 CVGDVLEQHLEIYCGEIERFESTRTAHMAISGVTVGVICHYWYKMLDKRMPGRTMRVVAKKIVLD 152

  Fly   105 QFICSPFYIAVFFLTMAILEDNTWEELEQEIREKALVLYAAEWTVWPLAQFINFLLIKPQYRVFY 169
            |.||||.||:.||:|:.:||..|..|:.:||:|||..||||||||||:|||:||..|...||:||
  Fly   153 QLICSPIYISAFFVTLGLLEQKTKHEVWEEIKEKAWKLYAAEWTVWPVAQFVNFYWIPTHYRIFY 217

  Fly   170 DNTISLGYDIYTSQVKYRK 188
            ||.||||||:.||:||:::
  Fly   218 DNIISLGYDVLTSKVKHKQ 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 37/60 (62%)
CG1662NP_572883.1 Mpv17_PMP22 169..230 CDD:461182 37/60 (62%)

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