DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and Mpv17

DIOPT Version :9

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001297457.1 Gene:Mpv17 / 17527 MGIID:97138 Length:178 Species:Mus musculus


Alignment Length:183 Identity:52/183 - (28%)
Similarity:80/183 - (43%) Gaps:19/183 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LWRRMTNAMDRFHQIAFSPKYLLFTNIGISVGLSMVGDTMEQSYERLIGELPDWNRTRTIRMGIS 70
            |||....|      :|..|..:.....|..:|   |||.:.|......| |......||:.|...
Mouse     3 LWRAYQRA------LAAHPWKVQVLTAGSLMG---VGDMISQQLVERRG-LQQHQAGRTLTMVSL 57

  Fly    71 GL-TVGLVCHYWYQHLDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAIL-----EDNTWE 129
            |. .||.|...||:.||:|.|..|....:.|:||||...:|.::..|...:.||     :|| |.
Mouse    58 GCGFVGPVVGGWYKVLDHLIPGTTKVHALKKMLLDQGGFAPCFLGCFLPLVGILNGMSAQDN-WA 121

  Fly   130 ELEQEIREKALVLYAAEWTVWPLAQFINFLLIKPQYRVFYDNTISLGYDIYTS 182
            :|:::..:..:..|...  :||..|..||.|:...||:.....:::.::.|.|
Mouse   122 KLKRDYPDALITNYYVR--LWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLS 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 122..185 CDD:282035 17/66 (26%)
Mpv17NP_001297457.1 Mpv17_PMP22 110..176 CDD:282035 17/66 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1944
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1324608at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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