DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and LOC100497159

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:XP_002934856.2 Gene:LOC100497159 / 100497159 XenbaseID:XB-GENE-29083539 Length:213 Species:Xenopus tropicalis


Alignment Length:181 Identity:67/181 - (37%)
Similarity:103/181 - (56%) Gaps:7/181 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MTNAMDRFHQIAFSPKYLLFTNIGISVG-LSMVGDTMEQSYE--RLIGELPDWNRTRTIRMGISG 71
            :|..:..:.|: |:.:.||.||. :|.| |...||.::|::|  |...:..||  .||.||...|
 Frog     9 LTRFVGSWKQL-FTGQTLLITNT-VSAGVLLSTGDAIQQTWEMRRNKEKKRDW--LRTGRMFAIG 69

  Fly    72 LTVGLVCHYWYQHLDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEIR 136
            ..:|.|.||||..||.:.|..|.:||:.|:|::|.:.||....:||:...::|.::.||...|.:
 Frog    70 CCLGPVDHYWYVFLDRILPGATVRVVLKKVLVEQIVASPILGTMFFMGTGLMEGHSVEESWVEFK 134

  Fly   137 EKALVLYAAEWTVWPLAQFINFLLIKPQYRVFYDNTISLGYDIYTSQVKYR 187
            .|...:|..||.|||.||.|||..:..:|||.|.|.::|.:|||...:|::
 Frog   135 GKFWEMYKVEWCVWPPAQIINFYFLPTKYRVMYVNFVTLAWDIYLCYLKHK 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 25/60 (42%)
LOC100497159XP_002934856.2 Mpv17_PMP22 119..180 CDD:461182 25/60 (42%)

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