DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycA and CLB3

DIOPT Version :10

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_010126.1 Gene:CLB3 / 851400 SGDID:S000002314 Length:427 Species:Saccharomyces cerevisiae


Alignment Length:428 Identity:118/428 - (27%)
Similarity:201/428 - (46%) Gaps:30/428 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EKNALAPRANFAVLNGNNNVPRPAGKVQVFRDVRNLNVDENVEYGAKKSNVVPVVEQFKTFSVYE 103
            |...:||..|.....|:.:....|.......||.|:....:......|..|.|:.|:..:.::.|
Yeast    17 EDENVAPIGNLKHRTGSLSHISSAHPRVALSDVTNIVATNSSNNSISKPKVAPIKERLDSAAIIE 81

  Fly   104 DNNDTQVAPSGKSLASLVDKENHDVKFGAGQKELVDYDLDSTPMSVTDVQSPMSVDRSILGVIQS 168
            :..     ....|:|...:.:::|:.....|:|.|:.|.:|......| |.|:.:..      .:
Yeast    82 EER-----LDANSVAQRKEADHNDLLTDREQEEPVEDDGESEEDEEED-QEPLLLQH------YA 134

  Fly   169 SDISVGTETGVSPTGRVKELPPRNDRQRFLEVVQYQMDILEYFRESEKKHRPKPLYMRRQKDISH 233
            ||..| .|.......|....|..:|....:.|.:...:|.||.|:.|..::|.|.||.:|.::..
Yeast   135 SDTLV-WEHAFRTYYRTTLDPNDDDVYDVVMVAELSNEIFEYMRKLEDLYKPNPYYMDKQPELRW 198

  Fly   234 NMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYEEIYPP 298
            :.||.||||:|:|.|:::|..|||||.:..:||:|.:..|..:|.||||.|:::||||||||..|
Yeast   199 SFRSTLIDWIVQVHEKFQLLPETLYLCINIIDRYLCKEVVPVNKFQLVGAASLFIAAKYEEINCP 263

  Fly   299 EVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTYAVLCDMPEKLKYMTLYISEL 363
            .:.:||:::::.|::..:|..|:.||..|.|:|..|....|:...:...|.....:.:..|:.|.
Yeast   264 TIKDFVYMSENCYSRNDLLDAERTILNGLEFELGWPGPMSFLRRISKADDYEHDTRTLAKYLLES 328

  Fly   364 SLMEGETYLQYLPSLMSSASVALARHILGMEMWTPRLEEITTYKLED---LKTVVLHLCHTHKTA 425
            ::|: ...:...||.:::.:..|::.|||...|:......:.|..|.   |.|::|..|  ...:
Yeast   329 TIMD-HRLVSAQPSWLAAGAYFLSKIILGQNQWSLAHVYYSNYTQEQILPLATIILENC--RYAS 390

  Fly   426 KELNTQAMREKYNRDTY--------KKVAMME-SVEMS 454
            |..|  |:..||:...|        |.:|:.| .||.|
Yeast   391 KRHN--AIWRKYSSRRYLHSSQIVAKWIALAEHRVERS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 CYCLIN_CCNA_rpt1 202..329 CDD:410208 52/126 (41%)
Cyclin_C 334..450 CDD:397230 28/127 (22%)
CLB3NP_010126.1 COG5024 4..421 CDD:227357 114/421 (27%)

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